Bacteroides helcogenes: Bache_3006
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Entry
Bache_3006 CDS
T01393
Name
(GenBank) Lytic transglycosylase catalytic
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
bhl
Bacteroides helcogenes
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bhl01011
]
Bache_3006
Enzymes [BR:
bhl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Bache_3006
Peptidoglycan biosynthesis and degradation proteins [BR:
bhl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Bache_3006
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
SLT_2
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
ADV44938
UniProt:
E6SPV9
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All DBs
Position
3564633..3566024
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AA seq
463 aa
AA seq
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MPIVKRHFFIAIILLLCCIWGCRGGHRAEDEKTNDDLQQIKDSGELVVLTLYSSTSYFIY
RGQDMGFQYELSEQFAKNMGVKLRVEVAKTVHELIEKLSAGKGDLIAYNLPITKEWKDSL
IYCGEEVITHQVIVQRIDGRSKPLKDVTELIGKDIYVKPGKYYDRLTNLDEELGGGIHIH
KVTDDSISVEDLIMQVSQGKIPYTVADNDVAQLNTTYYSNLNTGLSISFDQRASWAVRKD
CPLLAAAADKWHKENMTSPAYTASMKRYFEISKAIPHSPILSLREGKISHYDKLFKKYAP
EIGWDWRLLASLAYTESNFDTNAISWAGAKGLMQLMPATAKAMGVPAGKEQDPEESIKAA
IKYIAATAKSFAQVPTEERINFILASYNSGIGHILDAMALAEKYGKNKYVWRDNVENFIL
LKSNEEYFTDPVCKNGYFRGIETYNFVRDITSRFEQYKKKIKG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccaattgtcaagcgtcatttttttatcgcaataattttgctgctttgctgcatttgg
ggatgccgtggaggtcatcgtgcggaagatgaaaaaaccaatgatgacttgcaacagata
aaagatagtggagaattggttgtattaacattatacagttccacttcttatttcatttac
cgaggacaagacatgggatttcagtacgaactgagcgaacagtttgccaaaaacatgggc
gtgaaattgcgcgtggaagttgcaaaaacggtacatgaactgatagaaaagctatcggct
ggtaaaggagatctgattgcttataacctgcccattacgaaagaatggaaagacagcctg
atttattgcggagaagaggtcatcacccaccaagtaatcgttcagcgcattgacggacgc
tccaaacccttgaaagatgtgactgaacttataggaaaagacatatatgtaaagcccgga
aaatattatgaccggctgacaaatctggatgaagaattaggaggtggcatccacatccat
aaagtcacggacgacagcatcagcgtagaagatttgataatgcaggtatcgcaaggcaaa
attccctataccgtagcagacaatgatgtagcacaactcaataccacttattattccaac
ctgaataccggtttgtccatcagctttgaccaacgcgcatcatgggctgtccgtaaagac
tgcccgctactggctgccgctgccgacaagtggcataaagaaaatatgacttcaccggcc
tacacggccagcatgaagcgatatttcgaaatcagcaaagctattccccactcacctatc
ctttctttgcgtgaagggaaaatttctcactatgacaaactattcaagaaatatgctccg
gagattggctgggactggcgtttgcttgcctctcttgcctatacggaatcaaactttgat
accaatgccatatcgtgggcaggagccaaaggattgatgcaactgatgcctgccacggca
aaagccatgggagtaccagcaggaaaagagcaagatccggaagaaagcatcaaagccgcc
ataaaatatatagctgctactgccaaaagtttcgcacaagtgcccacagaagaacgtatc
aattttatactggcatcttataattcaggaatcggacacattctggatgccatggctttg
gctgaaaaatatggaaagaacaaatacgtatggcgcgataatgtagaaaatttcatcctg
ctgaaaagcaatgaagagtattttaccgatccagtctgtaaaaacggttatttccgtgga
atagaaacttataatttcgtgagggatataacatcacgatttgaacaatataaaaagaaa
attaagggataa
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