Bacteroides helcogenes: Bache_3164
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Entry
Bache_3164 CDS
T01393
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bhl
Bacteroides helcogenes
Pathway
bhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bache_3164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhl03019
]
Bache_3164
03400 DNA repair and recombination proteins [BR:
bhl03400
]
Bache_3164
Enzymes [BR:
bhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bache_3164
Messenger RNA biogenesis [BR:
bhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bache_3164
DNA repair and recombination proteins [BR:
bhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bache_3164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ADV45089
UniProt:
E6SR20
LinkDB
All DBs
Position
3751197..3753008
Genome browser
AA seq
603 aa
AA seq
DB search
MLQTLKTYFGYDSFRPLQETIIRHLLDRKDALVLMPTGGGKSICYQLPALLCEGTAVVVS
PLISLMKDQVETLCANGIAAGALNSNNDETENASLRRLCMEGKLKLLYISPEKLLAEANY
LLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIIALTATADKITREDII
KQLHLNQPKIFISSFDRPNLSLTVKRGYQQKEKGKAILDFINRHPGECGIIYCMSRSKTE
SVAQMLQKQGIKAAIYHAGLSAAKRDEAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIH
YNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADLILLTKFATESGQQSINIEKLQRMQQ
YAEADICRRRILLSYFGENTAHDCGNCDVCKNPPERFDGTIIVQKALSAIVRTDQQIGTG
MLVDILRGTLSSEIAERGYHHLKTFGAGREVPARDWQDYLLQMLQLGYFEIAYNENNHLK
ITASGSDVLFGRCSAQLVVIRREEAADSKRGRKRKSSAPVQELPLGLPNTESEELFEALR
SLRKRLADQEALPAYIVLSDKVLHLLSASRPTTIEEFGNISGIGEYKKKKYGKDFIELIR
KYC
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaactctcaaaacatatttcggttatgacagtttccgtcctttgcaagagacg
atcatccgtcatttgttagaccgcaaggatgcattagtactaatgccaacaggtggtgga
aaatccatttgttaccaactgccggcgttgctttgcgaaggcactgccgtagtggtttct
ccccttatatcattgatgaaagatcaggtcgaaaccctgtgtgccaacggtattgccgcc
ggtgcgctgaacagcaacaatgatgagacggaaaatgcgtccctgcgccgcttgtgcatg
gaaggcaaattaaaactgctctatatctcacccgaaaaactattggctgaagccaactat
ttactgcgggatatgcacatctctttattcgccatcgacgaagcacactgcatctcacag
tggggacatgatttccgtccggaatatacacaaatgggagttctgcaccaacaatttcca
caaattcccatcattgcactgaccgctactgccgacaagattacccgtgaggatattatt
aaacaactccatcttaaccaaccgaagattttcatctcatctttcgatcgccccaacctg
agccttacagtaaagcgcgggtatcaacaaaaggaaaagggcaaggctattcttgatttt
atcaaccggcatccgggagaatgcggcatcatctactgcatgagccggagtaaaacagag
tcggtagcacaaatgctacaaaagcagggcatcaaggcagccatctaccatgccgggttg
tctgccgccaaaagagacgaggcacaagatgattttatcaatgaccgtgtacaagtggta
tgcgccactatcgccttcggaatgggtatcgacaagagcaatgtacgctgggtaattcat
tataatttaccaaaaagcatcgaaagcttctatcaggaaataggccgtgccggaagagac
gggctgccaagtgacaccctcctcttctattcactggcagacctcattctgctcacaaaa
tttgctacggaaagcggacagcaaagcatcaatatagagaagctgcaacgcatgcagcag
tatgccgaagccgacatctgccgccgccggattctgctcagttatttcggagaaaacacc
gcacacgactgcggaaactgcgatgtctgcaagaatcctccggaacgatttgatggtact
ataattgtacaaaaagcattgagtgccatcgtgcgtacagatcagcagataggtacggga
atgctggttgacatcctaagaggcactttgagttccgaaatagccgaacgtggctaccac
catctgaaaacattcggagccggacgtgaagtacctgcccgtgattggcaggattacctg
ctgcaaatgctccagttgggctacttcgagatagcctacaatgaaaacaatcacttgaaa
atcactgcaagcggcagtgatgtcttatttgggagatgcagtgcgcagcttgtggtgatc
cgccgggaagaagccgcagacagcaaacggggacgtaaacgcaaatccagtgctcccgta
caagagctgcctttgggactgcccaatacagaaagcgaagaattgttcgaagccctacgc
agcctccgtaagcgccttgccgaccaagaagcgctgcctgcctatatcgtgctgtccgac
aaggtgctacatttgctcagcgcttcacgccccaccaccatagaggagtttggcaacatc
agcggcataggtgaatataaaaagaaaaaatacggtaaagactttatcgaactgatacgc
aaatattgctaa
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