Bordetella holmesii 44057: D558_0057
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Entry
D558_0057 CDS
T03379
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhm02000
]
D558_0057
Transporters [BR:
bhm02000
]
Other transporters
Pores ion channels [TC:
1
]
D558_0057
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AIT24756
LinkDB
All DBs
Position
52693..54669
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AA seq
658 aa
AA seq
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MLDTPASVDVIDGATLRANALQVNLSENLSAVPGLQIPNRQNFAQDLQLSIRGFGARSTF
GVRGVRIYVDGIPATMPDGQGQTSNIDISSADRVEVLRGPYSALYGNSSGGVVQVFTEDG
ARPPHVQTSMAAGSFNTLRYGVQASGASGTGASDLDYVVGINRFTSDGYRDHSGARKNLA
NAKLGLQLDDDSRLTLVLNRVDLKAQDPMGLTRQEFDDDPRAASPAAQRFNTRKTVLQTQ
GGLVYERQVDADNALRVMVYYGQRETWQYQSIPVAVQSPPAQSGGVIGLRRDYGGADVRW
TSHMTLAGQPFTVVGGLAYDSLHEIRKGYENFTRGGATLGTKGALRRDETNEVYNLDPYL
QTSWEFLPRWTLDTGLRYSSVDFDSRDHYIVAGNGDDSGDARYRRALPVATLRYALDDDS
NVYVSFGKGFETPTMNEISYRPDGQPGLNFGLQPSVSTNLEAGIKRRFPTGLATAAVFHT
RTENEIVSAGSIDGRSAFRNGGRTRRDGLELAWDGEFGSHWRTRLAYTYINARYRDDVAG
TGIAAGNTIPGIARQALYAALAWAPPQGWQAGIEGRYLDKLYVDDANSDAAAGYVVAALS
AGYIWKHGPWTWSTYARVDNLFDRRYAGSVIVNEGNGRYFEPAPGRNWSAGLTATYRF
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacacaccggcatcggtggatgtcatcgacggcgccacgctgcgggccaacgcc
ctgcaggtcaatctctcagagaacctcagcgcagtgcccggactgcagataccgaatcgc
cagaacttcgcgcaggatctgcaactgtccatccgcggctttggcgcacgctcgaccttc
ggcgtgcgtggcgtgcggatttatgtcgacggcatcccggccaccatgcccgacgggcag
gggcagacctccaatatcgacatcagctcggccgaccgggtcgaagtcctgcgagggccc
tactcggcgctctatggaaactcatcgggcggcgtggtgcaggtcttcaccgaagatggc
gcccgtccaccgcacgtgcaaaccagcatggccgcgggcagcttcaacacgcttcgctat
ggcgtacaagccagcggagcaagcggcaccggtgcaagcgacctggactatgtcgtgggc
ataaatcgcttcaccagcgatggctatcgcgatcacagtggcgcgcgcaagaatctggcc
aacgccaaactcggtctacaactcgacgatgacagccggctgacactggtgctcaacagg
gtcgacctgaaagcccaggatcccatgggcctgacgcgacaggagttcgacgacgatccg
cgtgccgcctcgcccgcggcgcagcgtttcaacacccgcaagacagtgctgcagacgcaa
ggcggcctggtgtatgagcgccaggtcgatgccgacaatgcattgcgcgtcatggtgtat
tacggacaacgcgaaacctggcaatatcagagcatccccgtagccgtgcagagtccgcct
gcgcagtccggcggcgtcatcggcctgcgccgtgattatggcggcgccgacgtgcgctgg
acttctcatatgaccctggccggccagccctttaccgtcgtgggcggactggcctacgac
agcctgcacgagatccgcaaaggctatgaaaacttcacccgtggcggcgcgacgctgggc
accaagggcgccttgcgccgggatgagaccaatgaggtctacaacctcgacccttacctg
cagacgtcgtgggaatttctgccccgctggaccctggacaccggcctgcgctatagcagc
gttgacttcgattcgcgcgatcactacatcgtggcgggcaatggcgatgacagcggcgac
gcacgctatcggcgcgctctgccggtggccaccctgcgctatgcgctagacgatgacagc
aatgtctatgtttctttcggcaaggggttcgagacgccgacgatgaacgagatatcctat
cgtcccgacggccagccaggcctgaacttcggcctgcaaccctcggtcagcaccaatctg
gaagccggtatcaagcgccgttttccgaccggcctggcgacggcggcggtctttcacacc
cgcacagaaaacgaaatcgtctcggcaggtagcatcgacggccgcagcgccttccgcaat
ggcggacgcacacgccgcgacgggctggagctggcctgggacggcgagttcggctcccac
tggcgaacgcgtctggcctatacctatatcaatgcgcgctaccgcgacgacgtggccggc
acgggcatcgcagcgggcaatacgatccccggcattgcccgccaggccctttacgccgcg
ctggcctgggcgccgccgcaaggctggcaggccggtatcgaaggccggtatctggataag
ctgtacgtcgacgacgccaacagcgatgcggccgccggctatgtggtggcggcgctatcg
gcaggctacatctggaagcatgggccctggacctggagcacctatgcccgcgtggacaat
ctgttcgaccgccgctacgccggctcggtcatcgtcaacgaaggcaatggtcgctacttc
gagcccgccccgggccgcaactggagcgcgggcctgaccgcgacctaccgcttctga
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