Bordetella holmesii 44057: D558_0331
Help
Entry
D558_0331 CDS
T03379
Name
(GenBank) bacterial extracellular solute-binding s, 5 Middle family protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D558_0331
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhm02000
]
D558_0331
Transporters [BR:
bhm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D558_0331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIT25022
LinkDB
All DBs
Position
complement(304660..306231)
Genome browser
AA seq
523 aa
AA seq
DB search
MRRTLIALAIAAAVAMPFASQAKTLRWAAQGDILTFDPHSQNEGMTIAANSYVYEPLVDY
DKDFKVVPRLATSWEQVSPTLYRFKLREGVKFHDGAPFTADDAVFSIHRAMAPTSNYKAY
TTGIKEARKVDDHTIEIETTAPNPVLLRQLPNVFIMNRAWSEKHNVAKPQDFVNKEETFA
ARNTNGTGPYKLKSREVDVRTTFEENPDWWNKKDKVGNVTEVVFTPIKQNATRTAALLSG
EIDFVLDPAAQDLDRLRQQAKVVEGNEYRTIYIGYDQKRPELLYSSIKGKNPFQDARVRE
ALYRAIDADAIKRAVMRGLSAPTGTMIAPQVHGWTEDLHKRVPYDPEKARALLKEAGYDG
TLNFTLDCPNNRYINDEAICQAIVGMWAKVGVKAALNAMPRATYFPKVQSNDTSVYLFGW
GVPTFDAMYTLQNLIHSKGEGADGMYNIGNYSNKDVDAIIDRVKTETDAAKRDAYIHKAL
EIHAKEFGHIPLHDQVIPWAMRKNVSVIHRADNRLVADWVKVD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcaccctgatcgcgttggccatcgccgccgctgttgccatgccttttgcctcg
caagcgaaaaccttgcgctgggccgctcaaggcgacatccttaccttcgatcctcactcc
cagaacgaaggcatgaccatcgctgccaatagctatgtctatgagccgctggtggattac
gacaaggatttcaaggtcgtgccgcgcctggcgacttcgtgggagcaagtctctccgacg
ttgtatcgcttcaaactgcgcgagggcgtcaagttccatgatggtgcgccgtttacggcc
gatgatgccgtattctcgatccatcgcgccatggctcccacatccaattacaaggcctat
acgaccggcatcaaggaagcacgcaaggtcgatgatcacaccatcgagatcgagacgacc
gcaccgaatccggtgctgttgcggcagttgcccaacgtcttcatcatgaatcgggcctgg
tcggagaagcacaacgtcgccaagcctcaggatttcgtcaacaaggaagagaccttcgcc
gcgcgcaataccaacggcacaggtccctacaagctgaaatcgcgcgaagtcgatgtacgc
accaccttcgaggagaatccggactggtggaacaagaaagacaaggtcggcaatgtgacg
gaagtggtgttcactcccatcaagcagaacgccacacgcaccgcggcgctgctttccggt
gagatcgactttgtgctcgacccggccgcgcaggatctggaccgcctgcgtcagcaggcc
aaggtggtcgagggcaacgaatatcgcaccatctacatcggctatgaccagaagcggcca
gagctgctgtactccagcatcaagggcaagaatcccttccaggacgcgcgggtgcgcgag
gcgctttaccgcgccatcgatgccgacgccatcaagcgggcagtgatgcgtggcctgtca
gcacccaccggtaccatgatcgcgccgcaggtgcatggctggaccgaggacctgcacaag
cgcgtgccctacgacccggagaaggcccgcgctctgctcaaggaggcgggctacgacggc
accttgaacttcacgctggactgtccgaacaaccgctacatcaacgatgaggccatttgc
caagcgatcgtggggatgtgggccaaggtgggcgtgaaagccgcgttaaacgccatgccg
cgcgcgacctatttccccaaggttcagagcaacgacaccagcgtctatctgtttggctgg
ggggtgcccacgttcgatgccatgtataccttgcaaaacctcatccacagtaaaggagag
ggtgccgacgggatgtacaacatcggcaactacagcaacaaagatgtcgacgcgatcatt
gaccgcgtcaagaccgaaaccgatgcggccaaacgggatgcgtatattcataaggcgctg
gaaatacacgccaaagagtttggccatatcccgctgcatgaccaggtcattccctgggcg
atgcgcaagaatgtcagcgtgatccatcgcgccgacaatcgtctggtagccgactgggta
aaggtcgactga
DBGET
integrated database retrieval system
