Bordetella holmesii 44057: D558_0335
Help
Entry
D558_0335 CDS
T03379
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm00550
Peptidoglycan biosynthesis
bhm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D558_0335
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bhm01002
]
D558_0335
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bhm01011
]
D558_0335
Enzymes [BR:
bhm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D558_0335
Peptidases and inhibitors [BR:
bhm01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
D558_0335
Peptidoglycan biosynthesis and degradation proteins [BR:
bhm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
D558_0335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AIT25026
LinkDB
All DBs
Position
complement(310736..311866)
Genome browser
AA seq
376 aa
AA seq
DB search
MFALIVDAQAATAPAVDARAWLLLDVTTGQELASSQADMRIEPASLTKIMTAYLIYEDLA
AARLSLDQKVRISTRAWRVPAGSSRMFLEPGQQVSVQALLTGLMVQSGNDAAVALAEASA
GSVEAFVARMNRRAAELGLAHTRFASPAGLPDPQTYSTARDLGRLAQRYVADFPQWATRF
DAQREFEYGGIRQRNRNRLLWQDSSVDGIKTGHTGAAGYCLIATASRSEQGVTRRLIAVV
TGTDSDKSRTQAGQTLLDWGYQAYDLAPAWGSPASARVWMGASDEVSYAPRHAPYLAVPT
GRTPERQVVLNTPLRAPVQAGQQIGEVRWLLDGQVVGQAPLLASEEVAPASYAGRMMDAA
TLWVGQTLNIGPAAGG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgctctgatcgttgacgctcaggccgccacggcgcccgctgtcgatgctcgcgcc
tggctgctgctggacgtcaccaccgggcaggagctggcctcgagccaggccgacatgcgt
atagagccggcctcgctgaccaagatcatgacggcgtacctgatatacgaggatctggcg
gccgcacgtctgtctctggatcagaaagtgcgcatttcgacgcgcgcctggcgcgtgcct
gcgggcagctcacgcatgtttctggagcccggccagcaggtgagtgtgcaagcgctgctg
accgggctgatggtgcagtccggcaacgacgcggcagtcgctctggccgaagccagcgcg
gggtcggtggaggcctttgtggcccgcatgaaccggcgggcagccgaactcggcctggcc
catacgcgttttgccagtccggccgggctgcccgatccccagacctactccactgcgcgt
gatctgggcaggctggctcagcgttacgtggccgattttccccagtgggcgacgaggttc
gatgctcagcgcgagttcgagtacggggggatccgtcagcgcaatcgcaaccgccttctt
tggcaggacagcagtgtggacggcatcaagacgggccatacgggcgcagccggctattgc
ctcattgcgaccgccagccgttccgagcagggcgtgacgcggcgcctgatcgcggtcgtc
acgggtaccgattcggataaaagccgtactcaggctgggcagacgttgctcgattggggc
tatcaggcctacgatctggccccggcctggggttcccccgcgagcgctcgcgtgtggatg
ggggcaagcgatgaggtcagctatgctccgcggcatgcaccctaccttgcggtacccacg
gggcgcacgccagagcgtcaggtggttcttaatacgccgcttcgcgcgccggtgcaggcc
ggtcagcagattggcgaggtacgctggctgcttgacgggcaggtggtgggacaggcgccc
ttgttggccagcgaagaggtcgcgccggcctcctatgcaggtcgtatgatggacgcggcc
acgctctgggtaggccagacgctgaacatcggtccggccgcgggtggctga
DBGET
integrated database retrieval system
