Bordetella holmesii 44057: D558_0438
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Entry
D558_0438 CDS
T03379
Symbol
pth
Name
(GenBank) peptidyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
bhm03012
]
D558_0438 (pth)
Enzymes [BR:
bhm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
D558_0438 (pth)
Translation factors [BR:
bhm03012
]
Eukaryotic type
Release factors
D558_0438 (pth)
Prokaryotic type
D558_0438 (pth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-ProteinID:
AIT25129
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All DBs
Position
complement(415018..415605)
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AA seq
195 aa
AA seq
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MSEPIRLIVGLGNPGPDYETTRHNAGFWLADHLADDLRASFTLEKAFMGQVAKARFEGEN
VLLLKPITYMNRSGQAVGALARFYKLAPEQVLVLHDELDLLPGQVKMKQGGGHAGHNGLK
DIQAALGTPNFWRLRIGIGHPRTLNLAQQVADFVLHPPRRDEQLDIEKVIDRCRAIVPVL
LRGDFAQATRQLHTA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccgatccgcttgatcgtcgggctgggcaatcccggccccgactacgaaacc
acccggcacaacgccggcttctggctagccgaccatctggccgatgacttgcgcgcgtca
ttcacgctcgagaaagccttcatgggtcaggtcgccaaagcccgcttcgagggcgagaac
gtactgctgctcaagcccattacctacatgaaccgctccggccaggccgtgggcgcactg
gcgcgcttctacaaactcgcgcccgaacaggtgctggttcttcacgacgagctcgatctg
ttgcccggccaggtcaaaatgaagcagggtggcggccatgccggccacaatggcttgaaa
gacatccaggccgcgttgggcacaccgaacttctggcgcctgcgcatcggcatcggccat
ccccgcaccctgaatctggcccagcaggtggccgacttcgtgctgcatccgccgcgccgc
gacgagcagctcgacatcgagaaagtcatcgaccgctgccgcgctatcgtgcccgtgttg
ctgcgcggtgatttcgcgcaggccacccgccagttgcataccgcctga
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