Bordetella holmesii 44057: D558_0489
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Entry
D558_0489 CDS
T03379
Name
(GenBank) bacterial extracellular solute-binding s, 5 Middle family protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D558_0489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhm02000
]
D558_0489
Transporters [BR:
bhm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D558_0489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIT25178
LinkDB
All DBs
Position
462123..463643
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AA seq
506 aa
AA seq
DB search
MVAHGAYADTTIKAVMHSPLRLTDPHATTAYITTWHGYMIYDTLLATDADNKIQPQMLEQ
WEVSPDGKTYTMTLRDGLKWHDGTPVTSDDCVASIKRWAAGDGMGRTLLKFTDKIEKVDD
KRFRVVMKEPTDLVLRALSKPTGTAAFMMPKRVAELPIGQPITDMTGSGPFKVAEFKPGV
KTVYVKNADYVPRKEPASGLAGGKVVNVDRVEWEVMPDALTAANSLLSCEIDFVEQFPYD
LLPMVEGHQELKEETLSPVGYFNMYRFNFKHPPFDNKKIRQAAMYAIGQEDVMRALVGNP
KYWQTCASLWGCGTPLQSDIGKEMTVPSDISKAKTLLKEAGYDNTPILIMHATDVGTLSA
QPVVMAQALRKAGFNVNLQAMDWQSVATRRASKAAPAEGGWSILNTNWYATDIMDPVRSA
PAAANGDNAWFGWPDLPQIEELRTKFALSSDPEQQKKIADETQRIGVEEGLYVPLGQMSV
PTVYSTKLSGLVHAPAFAFWNVKKAP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgcacggcgcttacgccgacaccaccatcaaggcagtcatgcactcgcccttg
cggctgaccgacccgcatgccaccacggcgtacatcacgacctggcatggctacatgatc
tacgacacgctgctggccaccgatgcggacaacaagatccaaccgcagatgctcgaacaa
tgggaagtctcgcccgacggcaagacctacaccatgaccctgcgcgacggcctcaaatgg
cacgacggcacgccggtcacctcggacgattgtgtggcatcgatcaaacgctgggctgcc
ggcgatggcatgggccgcaccctgctcaagttcacggacaagatcgaaaaggtggatgac
aagcggtttcgtgtcgtcatgaaggaacccaccgatctggtgctgcgcgcgctgtccaag
cccacaggcacggccgcgttcatgatgcccaaacgcgtcgctgaactgcccatcgggcaa
cccattaccgacatgacgggttcgggtccgttcaaggtggcggaattcaaacccggcgtc
aaaaccgtgtacgtcaagaacgccgactatgtgcctcgcaaagagccggccagcggcctg
gccggaggcaaagtcgtcaatgtggaccgggtcgaatgggaggtcatgcccgacgcgctg
accgcagcgaattcgctgctgagctgtgagatcgacttcgtggagcagttcccttatgac
ctgctgcccatggttgaaggccaccaggagctcaaggaggagaccctgagcccggtgggc
tacttcaacatgtaccgcttcaacttcaagcacccgccctttgacaacaagaagatccga
caggccgccatgtacgccatcggccaggaagacgtcatgcgggccctggtgggcaatccc
aagtactggcagacctgcgcctccctgtggggttgcggcacgccgctgcaaagcgatatt
ggcaaggaaatgaccgtgccttccgatatcagcaaggccaagaccctgctcaaagaggca
ggctacgacaatacgcccatcctgatcatgcatgccaccgacgtcggcacgctcagtgcc
cagcctgtcgtcatggcgcaggcgctgcgcaaggcgggttttaacgtcaaccttcaggcc
atggactggcagagtgtggccacgcgccgcgcgtccaaggccgcgccggccgagggtggc
tggagcattcttaacaccaactggtacgccaccgacatcatggatccggtgcgctcggcg
cctgcggcggccaatggcgacaatgcatggtttggatggcccgatctgccgcagatcgaa
gaactgcgcaccaagttcgcgctcagctccgatccggagcaacagaagaagatcgccgac
gaaacgcagaggataggcgtcgaggagggactttatgtgcctctgggtcagatgtccgtg
ccgacggtgtactccaccaagctcagcggcctggtgcacgcgccggccttcgcgttctgg
aacgtcaagaaagccccctga
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