Bordetella holmesii 44057: D558_0506
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Entry
D558_0506 CDS
T03379
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhm02000
]
D558_0506
Transporters [BR:
bhm02000
]
Other transporters
Pores ion channels [TC:
1
]
D558_0506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
ABC_cobalt
RHD_RETREG1-3
Motif
Other DBs
NCBI-ProteinID:
AIT25195
LinkDB
All DBs
Position
complement(482761..486414)
Genome browser
AA seq
1217 aa
AA seq
DB search
MTKLRAVLRHLLIWWLPGLAILAAVVASFVFWLVASQTGSRVLLNAAVQMAGGEVQHIEG
SVLKGLRVGRLDVTVADTRIEASNLWLDIDWSELGHRRAYVRALTADRLAVGLPPTAPQS
STQAASGGMPDALSLPVSIDVDRLAVGEFALTRAGQPLPVSLHDIALALHVQREAAARLD
IQSLRVDHPEGRVRLTGLLDVQKLAAPWPLAARLEARIAAARPDATFCMEIGDLKASQKT
QDDAARAAQQGAYLVTRPEVVQGAASALGGKELDALEADLRRERWREAVRQLCPISLSLQ
AEGTLEQLAVTLQGSGAGLVIDAQAALEPMASFPLRDARLELKRDDGSGLRAVLDWESAS
EPGAPDHIQAHVVSDRLDLKRLLGDWLPAAVLSAQADIQVQVQDLSDLRSADLQLRIAPD
SRWNKQPLAGTLAAQVRSQEGSAVFAPGLPPGLSVPQLEMDLTLGKNRLHAHGALQDVRA
TLSLDVQAPDLAAFWPDLPGGGVVLKADVDGELSRHKGKVDARYTPPKPQPRRLGDAPVQ
AKLEFEGGWAEQDGLAGWRGRISGLSAQTAGFTLAVPGMLSLAYQPEAAAPAWQWQVGAA
DLQATFPDKQRLSLSHAGSRGGAGRWETAGRADNFELRATMLRQLMTALGQENKNAQANR
VNAVISDEQRRIALDFSWDLKYAGALSGRARLARRSGDLRIPGDPPVPLGLKTLQLDVTA
TAAQGDASRIDATLDLNTEKMGHLTATATTQLKGLALEPRQPIRADLSADIADLTWLSLF
VGDTLEVGGALRAQARVDGSLAGGWNANGTIDGDKLRVVRIDDGVRLVDGTLRARLVGDR
LVLDSLRFPAVLRVMPDEWRTKEWITTNPQAKGGYAEAKGEWNLTSMAGRIGVTLYRFPA
LQRSDRYAMVSGRVDIDIALPRITIDGDITADAGWVSLEILQGVPSLDDDVRVVRPGQDQ
KAGTPIQVQMDLKVDMGPRFYITGMGLEAGLVGNMQILMQGGRLTGLGALHTRAGGIEAY
GQRLRLRRGTLTFQGRLDNPILDIVALRTGEAVEAGVRVTGTAQRPRIDLVSYPDVSDVE
KLSWLVLGRGPDAGGGDTALLLSIGTALLGGGEPLYKQFGLDDVSMRTGAIGSSGSLLPD
RTVASSVNRDADADLATQFLVASKNFANGITLSVEQAMAGSETVGRASYRLAQGLSLDLK
GGSVNGIELIYRWVVGE
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaagctgcgcgccgttttgcggcatctgcttatctggtggttgccgggcctggcc
attctggccgctgtcgtggcctctttcgtattctggctggtggcgtcgcagaccggcagc
cgcgtgttgctgaacgccgccgtgcagatggccggtggcgaggtccagcacatcgagggg
tcggtgctcaagggcctgcgcgtgggccggctcgacgtgacggtggctgacacccgtatc
gaggccagcaatctctggctcgatatcgattggagcgaactgggtcaccgccgcgcttat
gtgcgggcgttgaccgcggaccgtctggctgtcggtttgccgccaaccgccccgcagagc
agcacccaggctgcttcgggcggcatgcccgacgcgctatccctgcccgtgtccatcgac
gtcgaccggctggccgtgggcgagttcgcgctgacccgcgcaggccagcccctgccagtc
agcctgcacgatatcgccttggcgctgcatgtgcagcgtgaagcggccgcgcggctggat
attcaaagtttacgggtggatcaccccgagggccgggtgcggctcacgggtttgctcgat
gtgcagaaactggccgcgccctggccgttggccgcgcgcctggaggcgcgcattgccgcc
gctcgcccggacgccacgttctgcatggaaattggcgacctgaaagccagccagaagacg
caggacgacgccgcgcgcgcagctcagcaaggggcttacctggtcacccgtcccgaggtg
gtacagggggcggccagcgcgctggggggcaaggagctcgatgcgctcgaggccgacttg
cggcgcgagcgctggcgggaggcggtgcggcagctttgcccgatctcgctgtcgctacag
gcagaaggtacgctggaacaattggcggtgacgttgcaaggcagcggcgcgggcctggtg
atcgacgcgcaggcagcgcttgaacccatggcgagctttccgctgcgcgatgcgcggctg
gagctcaaacgtgacgatggttcgggcctgcgcgcggtgctggattgggagtcggccagc
gagccaggcgcgcccgatcacatccaggcgcatgtggtctccgaccggctggatctcaag
cggctgctgggagactggcttcctgcggccgtgttgagcgcgcaggccgatattcaggtt
caggtgcaggatctgagcgacttgcgctcggccgatctgcaactgcggatcgcgcccgat
agccgctggaacaaacagcccttggctgggacgctggcggcgcaggtgcgcagccaggag
ggctcggccgttttcgcgccgggcctgccgccggggttgagcgtgccccaactggagatg
gatctcacgctgggtaaaaaccgcctgcatgcgcacggcgccttgcaggacgtccgcgcc
acgctgtcgctcgacgtccaggcgcctgatctggccgccttctggccagatctgccagga
ggcggtgtggtactcaaggccgacgtggatggcgaattaagccgccataaagggaaggtg
gacgcgcgctacacgccgcccaaaccgcagccacgccggctgggcgacgcaccggttcag
gccaagctggagttcgagggcggctgggctgaacaggatgggctggccggctggcgcggc
cggatctctggtctgtcggcgcagacggcgggctttacgctggccgtgcccggcatgctc
tcactggcatatcagcctgaagccgctgccccggcatggcaatggcaggtcggggcagcc
gacctgcaggccacctttccggacaagcagcgcctgtcgctgtcgcacgcgggctcgcgc
gggggggcaggtcgctgggagacagcaggacgagccgacaatttcgagctacgcgccacc
atgctgcgccagctcatgaccgccttgggtcaggagaacaaaaacgcccaggccaaccgg
gtcaacgccgtgatttccgatgagcagcggcggatcgcgctggatttttcctgggatctg
aaatatgccggggcgctgtcggggcgggcccgactggcgcggcgcagcggcgatctgcgc
atcccgggcgaccctcccgtgccgttgggcttgaagacgctgcagctcgatgtcaccgct
acggcggctcagggggatgccagccggatcgatgcgacgctggacctgaacaccgaaaaa
atgggccatctgacggccaccgccacgacccagctcaagggcttggcgctggagcctcga
cagcccatccgcgccgatctgagcgccgatatcgccgacctgacctggttaagcctgttc
gtgggcgatacgctggaggttggcggcgcattgcgggcccaggctcgcgtcgacggcagc
ctggccggcggctggaatgccaacggcacgatcgacggcgacaagctgcgggtggtgcgc
attgacgacggcgtgcgcctggtcgatggcacgttgcgtgcccgcttggtgggcgatcgc
ctggtgttggattcgctgcgttttcctgccgtgctgcgcgtgatgcccgacgagtggcgg
accaaggagtggatcaccaccaacccccaagccaaaggcggatatgccgaggccaagggc
gagtggaacctgaccagtatggcagggcgtatcggcgtcacgttgtatcgcttccccgcg
ttgcagcgttcggatcgctacgccatggtcagcgggcgggtggacatcgatatcgccctg
ccgcgcattaccatcgacggcgacattacggcagatgcgggctgggtcagcctggaaatt
cttcagggggtaccctccctggacgatgacgtgcgcgtggtccgtcccggccaggaccag
aaggccggcacgcccatccaggtgcagatggacctgaaggtcgatatggggccgcggttt
tacatcaccggtatggggctggaagcggggctggtcggcaatatgcagatcctcatgcag
ggcggccgcctcaccggcctgggggcgttgcacacgcgcgccggtggcatcgaggcgtac
gggcagaggttgcgcctgcggcgggggacgctgaccttccagggccggctggacaacccc
atcctggacatcgtggccttgcgcacgggcgaggcggtagaggcgggcgtgcgggtcacc
ggtaccgcccagcggccgcgcatcgatctggtctcttatccggacgtcagtgacgtcgaa
aagctttcctggttggtgctcgggcgtggtcctgatgccggcggcggcgataccgcgctg
ctgttgtctatcggcacggccttgctggggggcggtgagcctttgtataagcagttcggt
ctggacgacgtcagcatgcgcaccggcgccatcggcagctcgggcagcctgctgccggat
cgcacggtggccagctccgtcaaccgcgacgccgatgcggacctggccacgcaattcctg
gtggcgagcaagaatttcgccaacggcatcacgttgagcgtggagcaggccatggccggc
agcgagaccgtgggccgagcgagttaccggttggcgcaaggactgtctttggatctgaag
ggcggctcggtcaacggcatcgaactcatctaccggtgggtggtgggtgagtaa
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