Bordetella holmesii 44057: D558_0655
Help
Entry
D558_0655 CDS
T03379
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm00061
Fatty acid biosynthesis
bhm00071
Fatty acid degradation
bhm01100
Metabolic pathways
bhm01212
Fatty acid metabolism
bhm02024
Quorum sensing
bhm04146
Peroxisome
Module
bhm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D558_0655
00071 Fatty acid degradation
D558_0655
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
D558_0655
09145 Cellular community - prokaryotes
02024 Quorum sensing
D558_0655
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bhm01004
]
D558_0655
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhm04147
]
D558_0655
Enzymes [BR:
bhm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D558_0655
Lipid biosynthesis proteins [BR:
bhm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
D558_0655
Exosome [BR:
bhm04147
]
Exosomal proteins
Exosomal proteins of breast milk
D558_0655
Exosomal proteins of breast cancer cells
D558_0655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AIT25340
LinkDB
All DBs
Position
complement(622233..623918)
Genome browser
AA seq
561 aa
AA seq
DB search
MQRPWLAHYPQGVPAEISIAPYASLTDLLDQACKRHADRIACTAMGSDIRFAQLDQWARS
FAAWLQARGLARGSRVALMMPNVPAYLVALLGSLRAGMVVVNVNPLYKPDELQRQLLDSG
AETIVILENFAATLQAVGDRSDLKHVVVVGPGDLLGGLKAPLVNFAARHIKKLVPSWHLE
GAWPLSRVLQEGARAGFTPPELSMNDLAVLQYTGGTTGVPKGAMLTHGNLVANILQVGAV
ARPVLGDLNGPPLTMLSALPLYHVFALTVCGLFGLHAGMRNLLIINPRDQASLIAAWKRV
PVNVFPGVNTLFNALVDNPGFAGLDFSGLRLTLGGGMAVQPSVAERWLQITGHPLIEGYG
LSETSPVATVNPTDSAAYSGAIGLPLPSTDVAILDDLGNEVPLGERGEVAIRGPQVMAGY
WQKPQETALVMTADGFFRSGDIGIMDERGYTRIVDRKKDMIAVSGFKVYPNEVEAVIAAY
PGVRECAVIGVPDGHSGEAVRAYVVRRDASVTEADILKWCEGKLTGYKRPRAILFRDELP
KSNVGKILRRELRDEAVASRT
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaccctggctcgcgcactatccgcaaggcgtgcccgccgagatttccatcgcg
ccctacgcctcgttgacggacttgctggatcaagcctgcaagcgtcacgccgatcgcatc
gcctgcacggccatgggcagcgacatccggtttgcccaattggatcagtgggcgcgcagt
ttcgcagcttggttgcaggcgcgcggtctggcgcgtggcagccgggtggcgctgatgatg
cccaacgtacccgcttatctggtggcattgctgggcagcctgcgcgcaggcatggtggtg
gtcaatgtcaatccgctctacaaacccgatgaattgcagcgtcaactgctcgacagcggc
gccgaaaccatcgtcattctggagaacttcgcggcgaccctacaggccgtgggcgatcgc
agcgatctcaaacacgtggtcgtggtggggccgggggatctgctgggcggcctgaaggcg
ccgctggtcaacttcgcggcgcgtcacatcaaaaagctggtgccgtcctggcatctggag
ggggcctggccgttgtcgcgggttctgcaagagggcgcgcgcgcgggtttcaccccgccc
gaactgagcatgaacgacctggccgtgctgcagtacacgggcggcactacgggggtgccc
aagggggctatgctcacgcatggcaacctggtggccaatatcctgcaggtgggcgccgtt
gcgcggccggtgctgggcgacctgaacggcccaccgttgaccatgctcagcgctttgccg
ctctaccacgtgtttgcgctgacggtctgcggattgttcggcctgcacgccggcatgcgc
aacctgctcatcatcaatccccgcgatcaggcctcgttgattgccgcctggaagcgcgta
ccggtcaacgtgtttccgggtgtcaatacgcttttcaatgcgctggtggataacccgggc
tttgccgggctggatttttcgggcctgaggctgaccttgggcggcggcatggcggtgcaa
ccctccgtggccgagcgttggttgcagattaccggccatccgctcatcgagggttatggc
ttgtcggagacatcgccggtggcgaccgtcaacccgaccgattcggcggcctattcgggc
gcgattggtttgcctttgccgtcgactgacgtcgccattctggatgatctgggtaatgag
gtgccgttgggcgaacgtggcgaagtcgcgatccgtggcccgcaggtcatggccggctat
tggcagaaaccccaggaaaccgccctggtcatgaccgcggacggtttctttcgcagcggt
gatattggcatcatggacgagcgcggctacacgcgtatcgtggaccgcaagaaagacatg
attgccgtgtccggcttcaaggtctaccccaacgaagtcgaagccgtcattgccgcctat
ccgggcgtgcgcgaatgcgccgtgatcggcgtgcctgacgggcattcgggcgaggccgtg
cgcgcctacgttgtcaggcgcgatgcctcggtgaccgaagccgacattcttaagtggtgc
gaaggcaagcttacgggctacaagcggccgcgggcgatactgtttcgtgatgagctgccc
aaaagcaatgtgggcaagatattgcggcgcgagctgcgtgacgaggcggtggccagccgc
acgtaa
DBGET
integrated database retrieval system
