Bordetella holmesii 44057: D558_0675
Help
Entry
D558_0675 CDS
T03379
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm02024
Quorum sensing
bhm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D558_0675 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D558_0675 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhm03019
]
D558_0675 (hfq)
03036 Chromosome and associated proteins [BR:
bhm03036
]
D558_0675 (hfq)
Messenger RNA biogenesis [BR:
bhm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D558_0675 (hfq)
Chromosome and associated proteins [BR:
bhm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
D558_0675 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SRP14
Motif
Other DBs
NCBI-ProteinID:
AIT25360
LinkDB
All DBs
Position
complement(639272..639508)
Genome browser
AA seq
78 aa
AA seq
DB search
MSNKGQTLQDPFLNTLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFQVEVPAE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaagggcaaactttgcaagatccgtttttgaacacactgcgcaaggaacac
gtgccggtgtcgatctatctggtaaacggcatcaagcttcaggggcagatcgaatctttt
gatcaatacgttgtgctcttgcgcaacactgtcacgcagatggtatacaagcatgccatc
tccacggttgtgccggcccgtgccgtcaactttcaggtggaagttcccgctgaataa
DBGET
integrated database retrieval system