Bordetella holmesii 44057: D558_0686
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Entry
D558_0686 CDS
T03379
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D558_0686 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bhm01007
]
D558_0686 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhm03016
]
D558_0686 (valS)
Enzymes [BR:
bhm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
D558_0686 (valS)
Amino acid related enzymes [BR:
bhm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
D558_0686 (valS)
Transfer RNA biogenesis [BR:
bhm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D558_0686 (valS)
Prokaryotic type
D558_0686 (valS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AIT25371
LinkDB
All DBs
Position
648980..651859
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AA seq
959 aa
AA seq
DB search
MTQAADPKNDTAELSKSFEPTDIESRWYDEWNLRGYFQAGRHVETGTDPQPYCIQFPPPN
VTGTLHMGHAFNQTIMDGLIRYHRMTGDDTVFIPGTDHAGIATQIVVERQLDAQKLSRHD
LGRERFVEKVWEWKEQSGNTITSQVRRLGASADWPREYFTMDDRMSRGVVQTFVELYRQG
LIYRGKRLVNWDPKLLTAVSDLEVQSEETDGHMWHILYPFVDGPQTIIDEEGNPVTLRGM
TIATTRPETMLADGALCVHPDDPRYKHLVGKLVELPLCDRNIPIIADDFVDPKFGTGCVK
ITGAHDFNDYACALRHKLPLIVIFTLDAHINENGPTQFQGLERYEARKAVVAELEQKGYL
VKVEPHKMMQPKGDRTGVVLEPMLTDQWFVAMSEPAPEGTFNPGKSITEVALQAVADGSI
QFYPENWTTIYNQWLNNIQDWCISRQLWWGHQIPAWYAEDGRCFVAHSEEEALELARAAG
VTGPLTRDPDVLDTWFSSGLVPFTTLGWPEKTEDLARYLPSSVLVTGFDIIFFWVARMVM
LTMHMTGNIPFKHVYVHGLIRDADGHKMSKSKGNTLDPVDLIDGIDLEQLVAKRTYGLMN
PKQAGSIEKATRRQFPDGIPAFGTDALRFTMAAYATLGRNINFDLKCCEGYRNFCNKLWN
ATRFVLMNTEGHALHGTEQGELSFADRWIVSQLQALEADIARGFDDYRFDNIANALYRYV
WDEYCDWYLELAKVQIQTGTPAQQLGTRRTLIRVLEVVLRLAHPIIPFITEELWQKVSVV
AGKRIAGHADSVSVQPYPRANPAAIDLEAEAEVAELKAQIEAVRALRGEMGLSPAQRVPL
IAQGDAALLRRNAPYLAALAKLSQVDVADTLPDAGAPVQVVGKARLMLHVEVDVVAERAR
LDKEIARLEGEIGKAAGKLSNPSFVERAPAAVVEQEKARVAQFNETLAKVRDQRGKLGN
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagctgccgaccccaaaaacgacactgcggagctctcaaagagcttcgagccc
accgatatcgaatcacgctggtatgacgaatggaaccttcgcggctacttccaggcaggc
cgccacgtagaaacagggaccgaccctcagccctattgcatccagttcccgccgccgaac
gtgacgggcacgctgcatatgggccatgccttcaatcagaccatcatggatggcctgatc
cgctaccaccgcatgacgggcgatgacaccgttttcatccctggcaccgatcacgccggc
atcgccacgcagatcgtggtcgaacgccaactggacgcgcagaaactctcgcgccacgac
ttggggcgcgagcgcttcgtcgagaaagtgtgggaatggaaagaacagtccggcaacacc
atcaccagccaagtgcgccgcctgggcgcctcggcggactggccacgcgagtacttcacg
atggacgaccgcatgtcgcgcggcgtcgtccagacgttcgttgagctctaccgccagggc
cttatctaccgcggcaagcggctggtgaattgggatcccaagctgctgaccgccgtctcc
gacctcgaggtgcaatccgaggagaccgatggccacatgtggcacatcctctaccccttc
gtcgacggcccgcaaaccatcatcgacgaggaaggcaatccggtcaccctgcgcggcatg
accatcgcgaccacccgccccgagaccatgctcgccgatggggccctgtgcgtgcatccc
gacgacccgcgctacaagcacctggtgggcaagctggtcgaactgcccctgtgcgaccgc
aacatccccatcatcgcagacgacttcgtcgatccgaaattcggcaccggctgcgtgaag
atcaccggggcgcatgatttcaacgactacgcctgcgcgttgcgccacaaactgccgttg
atcgtcatctttacgctcgacgctcacatcaacgaaaacggccccacgcaattccagggt
ctggagcgctacgaagcccgcaaggccgtcgtcgccgagcttgagcaaaaaggatacctg
gtcaaggtcgagccgcacaagatgatgcagcccaagggcgatcgcactggtgtggtgctc
gaacccatgctgaccgatcagtggttcgtcgccatgagcgaaccggccccggagggcacg
ttcaatcccggcaagagcatcaccgaggtggcattgcaggccgtggccgacggtagtatt
cagttctatcccgagaactggaccactatctataaccagtggctcaacaatatccaggat
tggtgcatctcccgccagttgtggtggggccaccagattcctgcgtggtatgccgaggac
ggccgttgctttgtggcccactccgaagaagaggcactggagttggcccgcgccgctggc
gtgaccggtccgctgacacgtgacccggatgtattggacacctggttttcctccggcctc
gtaccgtttacgacgcttggctggcccgagaagaccgaagacctggcccgctatctgccg
tccagcgtgctggtcacgggctttgacatcattttcttctgggtcgcgcgcatggtgatg
ctcaccatgcacatgaccggcaacattccgttcaagcacgtttacgtgcatggactgatc
cgcgatgccgacggccataagatgagcaaatccaaaggcaacacgctggatcccgtcgac
ctcatcgacggcatcgacctggaacagctcgtagccaagcgcacctatggcttgatgaac
ccaaagcaggccggctcgattgaaaaggccacgcgccgccagttccccgatggcattccg
gctttcggtacggacgcactgcgctttaccatggcggcctacgccacgctgggccgcaat
atcaatttcgacctcaagtgctgcgagggttaccgcaacttctgcaacaagctctggaac
gctacccgcttcgtgctgatgaacacggaaggccacgctctgcatggcaccgagcaaggc
gagctgtcctttgcggatcgttggatcgtcagccaattgcaagcgttggaagcagacatt
gcgcgcggctttgacgactaccgcttcgacaatatcgccaatgcgttgtatcgctacgtc
tgggatgagtactgcgactggtatctcgaactggccaaggttcagatccagaccggcacc
cctgcccagcaactgggcactcgccgcacgctcatccgcgtgctggaagtcgtcctgcgc
ctggctcaccccatcatcccattcattacggaagagctctggcagaaagtttcggtcgtc
gccggcaaacgcatcgccggccacgccgacagcgtcagcgtgcagccctacccgcgcgcc
aatcccgccgcgatcgacctcgaggcggaagccgaagtcgctgaactcaaggcccagatc
gaagccgtgcgcgcgctgcgcggcgagatgggcctgtcgccggcgcagcgcgtcccgctg
atcgcgcagggtgacgccgccctgctgcgccgcaatgcgccgtatctcgcggcgcttgcc
aaactcagccaggtcgatgttgccgacacgctgcccgacgccggagcccctgtgcaggtg
gtgggaaaggccaggctcatgctgcatgtcgaagtcgacgtcgtggccgagcgcgcgcgc
ctggacaaggagatcgcccgcctggagggcgagatcggcaaagctgccggcaaactgagc
aaccccagttttgtcgaacgggcgccagccgccgtggttgaacaagaaaaggcccgcgtg
gcccagttcaacgaaacgctggccaaggtgcgcgaccagcgcggcaagctgggtaattaa
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