KEGG   Bordetella holmesii 44057: D558_0722
Entry
D558_0722         CDS       T03379                                 
Name
(GenBank) toprim domain protein
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
bhm  Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:bhm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bhm03032]
    D558_0722
   03036 Chromosome and associated proteins [BR:bhm03036]
    D558_0722
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bhm02048]
    D558_0722
Enzymes [BR:bhm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     D558_0722
DNA replication proteins [BR:bhm03032]
 Prokaryotic type
  DNA Topoisomerases
   D558_0722
Chromosome and associated proteins [BR:bhm03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    D558_0722
Prokaryotic defense system [BR:bhm02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    D558_0722
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: AIT25407
LinkDB
Position
complement(684008..685894)
AA seq 628 aa
MYTRTENPLHIVQEVIDNAADEALAGHGKQIQVTLHADGSISVEDDGRGIPVGMHPEENA
PVVELVFTRLHAGGKFDKQGGGAYAFSGGLHGVGVSVTNALAKRLEVVVWREGGVHRLVF
AGGDVVEAIAPYPEGGRKKSGTRVRVWPDPKYFDSPNIPMGELTHLLRSKAVLLSGVKVV
LVNEKSGDSKTWHYQDGLRGYLSEALAGAELMVPFFEGEQYAGSDHESFAEGEGAQWVVA
WSEDGNVVRESYVNLIPTPAGGTHESGLREGLFGAVKSFAELHSLLPKGVKLLPEDVFAR
ASFVLSAKVLDPQFQGQIKERLNSRDAVRLVGGFAKGALDLWLHSNVEYGKKLAELAIRQ
AQARVRSAQKVEKRKSSGVAVLPGKLTDCEASDASRTEVFLVEGDSAGGSAKMGRDKEFQ
AILPLRGKVLNSWEVDRDRLFANNEIHDISVAIGVDPHGPNDHPDLSGLRYGRICILSDA
DVDGSHIQVLLLTLFFKHFPRLVEAGHVYVARPPLFRLDVPAQGKRPARKIYCLDDGELE
AAQDKLRKEGVREAAWSVSRFKGLGEMNPAQLWETTMNPDTRRLLPVGYGNLSPSDTTRM
FDMLMGKGESAQRRTWIEEKGNLAELDI
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgtacacccgtaccgagaaccccctgcatatcgtgcaggaggtcatcgacaacgcggcc
gacgaagcattggccggccacggcaagcaaattcaggtcacgctgcacgccgacggcagc
atttccgtcgaggatgacggccggggcatcccggtcggtatgcatcccgaagaaaatgcg
cccgtcgtggagctggttttcacacgcctgcacgcaggcggcaagttcgacaagcagggc
ggcggcgcctatgccttttccggcggcctgcacggcgtaggcgtgtccgtgaccaatgcc
ttggcaaaacgcctggaggtcgtggtctggcgcgagggcggtgtgcatcgtctggtgttt
gccggcggtgatgtcgtcgaagccatcgccccttatcccgaaggtggccgcaaaaagtct
ggcacccgcgtacgggtatggcccgacccaaagtatttcgacagccccaatattcccatg
ggagagctcacccatctgctgcgtagcaaggctgtgctgctgtctggcgtgaaggtggtg
ctcgtcaacgaaaaaagcggcgacagcaaaacctggcactaccaggatgggctgcggggc
tacctgtccgaagccttggctggggccgagctcatggtgccgtttttcgagggcgagcag
tacgccggttccgaccatgagagctttgccgaaggcgagggggcccaatgggtcgtggcc
tggtcagaggacggcaatgtcgtgcgcgagtcctatgtcaacctgattccgacccccgca
ggcggcacgcacgagtccggcctgcgcgagggcctgtttggtgcggtcaagagttttgcc
gagctgcacagcctgcttcccaagggtgtgaagcttctgcccgaggatgtttttgcacgt
gccagcttcgtgctctcggccaaggtcctggatccgcaattccaaggccagatcaaggaa
cgcctgaacagccgtgacgcggtgcgtcttgtgggcggtttcgccaagggcgcgctggac
ctctggctgcacagtaacgtcgagtacggcaagaaattggcggagctggccattcgccag
gcgcaggcgcgcgtacgctcggctcagaaggtggaaaaacgcaagagttcgggcgtggcc
gtgctgccgggcaagctgacagactgcgaggccagtgacgccagccgcaccgaagtgttt
ctcgtcgagggcgactccgcaggcggctcggccaagatggggcgcgacaaagaattccag
gccattttgcccctgcgcggcaaggtgctcaattcctgggaggtcgatcgcgaccgcctg
ttcgccaacaatgaaatccacgatatttccgtggcgatcggcgtggacccgcacggcccg
aatgaccatccggatctgtccggtctgcgctatggccgcatctgtattctgtctgatgcc
gacgtcgacggttcgcacattcaggtgttgctgctgacgctgttcttcaaacacttccca
cgcctggtcgaagccgggcacgtctacgtggccaggccgccgctctttcgtctggatgtt
cccgcgcagggcaagcggccggcgcgcaagatctattgtctggacgacggcgagctcgag
gcggcgcaggacaagttgcgcaaagagggcgtgcgcgaggcggcctggagcgtgagccgc
ttcaagggcctgggcgaaatgaaccccgcgcaactctgggaaaccacgatgaatccggac
acccgacggctgctgccggtgggctatgggaatctgtcgccatcggatacgacacgcatg
tttgacatgcttatgggcaaaggcgagtcggcacaacggcgcacctggatcgaagagaaa
ggcaatctggcggagctggacatctga

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