Bordetella holmesii 44057: D558_0830
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Entry
D558_0830 CDS
T03379
Name
(GenBank) bacterial extracellular solute-binding s, 5 Middle family protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D558_0830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhm02000
]
D558_0830
Transporters [BR:
bhm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D558_0830
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIT25510
LinkDB
All DBs
Position
complement(791177..792679)
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AA seq
500 aa
AA seq
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MSKLRIALALAGLVASAAVSAQTTLRIGLQDDPDVLDPVRARTFVGRIVFASLCDRLVDI
TPDLKFVPQLAESWSTSEDGKSLTFTLRKGAVYHDGAPIDAASVKANLDRAMTLPDSNRK
SELSSVASVEAPDAQTVVLRLKEPDASLLSQLSDRAGMMISPATFDKDPGSKPVCSGPYR
FKERVQNDRIVLEKFPQYWDAPHYHFDQVVFTPIPDSTVRLNNLRAGGLDIVERIAPSDA
DAVKNDAKLTLAPVTGLGFQSIAVNIGNGARADTPLSKDARVRQALDLAIDRDVINQVVG
QGMFQPAHQPFLPASFAYDKSVEHAGRDPKKAKELLKAAGHDRVKFELTYGNNTTMQQVM
EIIQAMGAEAGFDITLRPLEFAAVQAALARGDFQVGQTGWSGRVDPSGNIHQYVSCKGNL
NDGRFCNADVDKLLNEARVTSDEGKRRALYSQVLQTMQAERPQIYLFYLPWVFGAQKKLE
GFVAYPDGLIRLKDVKVAKK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacttcgtatcgccctggcccttgccggcctggtcgccagcgctgccgtgtcg
gcgcaaaccaccttgcgtatcggcctgcaggatgatcctgacgtgctggatccggtccgc
gcgcgcaccttcgtcggacgcattgtgttcgcctcgctgtgcgaccgtctggtcgacatc
acgcccgatctgaagttcgtgccgcaactggccgagtcctggtccacgtcggaagacggc
aagtcgctgaccttcacgctgcgcaaaggggcggtctaccatgacggcgcacccatcgat
gccgcctcggtaaaggccaacctcgatcgcgccatgacgctgcccgacagcaatcgcaag
agcgagttgtcttcggtggccagtgtcgaagcgcccgatgcgcagaccgtcgtgttgcgc
ctgaaagaacccgacgcgtccttgctgtcgcaactgtcggaccgtgccggcatgatgatt
tcgccggccaccttcgacaaggatccgggtagcaagcccgtttgctccggcccgtaccgg
ttcaaggagcgcgtgcagaacgaccgcatcgtgctggagaaattcccgcagtactgggat
gcaccccactaccatttcgatcaggtggtcttcacgcccattcctgattcgaccgtgcgc
ctgaacaacctgcgcgccggtggcctggatattgtcgagcgcattgcgccctccgacgcg
gatgcggtcaaaaacgacgccaagctgacgctggcgccggtcaccggcctgggctttcag
tccatcgccgtgaacatcggcaatggcgcgcgcgccgacacgccgctgtccaaggacgca
cgcgtgcgtcaggccctggatctggcgatcgatcgcgatgtgatcaaccaggtcgtgggc
cagggcatgttccagcctgcgcaccaacctttccttcccgccagcttcgcctacgacaag
agcgtcgagcacgcagggcgcgatcccaaaaaggccaaagagttgctcaaggccgccggc
catgaccgtgtgaagttcgagctcacctatggcaacaacaccaccatgcagcaggtgatg
gaaatcatccaggccatgggtgcagaagccggtttcgacatcacgttgcggccgctggag
tttgccgcggtgcaggccgcgctggcgcgtggcgacttccaggtcggacagacgggctgg
tccggccgtgtcgacccgagcggcaatatccaccagtacgtcagttgcaaaggcaatctg
aacgatggccgcttctgcaacgccgatgtggacaaactgctcaacgaggcgcgcgtgacg
tccgacgaaggcaagcgccgcgccctgtacagccaggtgctgcagacgatgcaggctgag
cgtccgcagatctatctgttctacctgccctgggtgtttggcgcgcagaaaaagctcgag
ggattcgttgcctatccggatggcctgatccgcctcaaagacgtcaaggtagccaagaag
tga
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