Bordetella holmesii 44057: D558_0885
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Entry
D558_0885 CDS
T03379
Name
(GenBank) periplasmic binding domain protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm02010
ABC transporters
bhm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D558_0885
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D558_0885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhm02000
]
D558_0885
Transporters [BR:
bhm02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
D558_0885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AIT25565
LinkDB
All DBs
Position
complement(845684..846886)
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AA seq
400 aa
AA seq
DB search
MHYRSIAALALGLAFSSAQANDANGVKIGVLTDMAGVTADATGKGSVEAARMAIEEVGGR
VLDKPVSLVVGDHQHKPDIGSSLVRKWYDADGVDVVVDVPNSSVALAVQGIAREKKKLVL
VSSAGTTALSQAQCSPYGVQWTYTTYALSRGTANAVVKEGNKRWFILASDYAFGKQLAAD
TEAVVKADGGQVLGTVYHPLNASDFASFLLQAQASKAQIIGIANAGGDTISTIKQAAEFG
VSGGGQQLAAMLLLLTDVHSLGLQAAQKTYLTVPSYWDMNEGTRKFSKDFQARVGHPPTF
LQAGVYGSVRHYLRAVQAAGTTDSDAVMAKMKALPIDDAFSQNARIREDGLVVRDMMLAQ
VKTPEQSKGAWDYYNIVRTIPGDTLVWPLSESQCPLVKKP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcactatcgcagtattgctgcactggcgttgggcctggcgttcagtagcgcgcaggcc
aatgatgccaacggggtcaagattggggtactgaccgacatggctggcgtcacggccgat
gccaccggcaaggggtcggtcgaggccgcgcgcatggcgatcgaggaagtgggcggccgg
gtgctggacaagcctgtgagcctggtggtgggcgatcatcagcataagccggacatcggc
agcagcctggtgcgcaagtggtacgacgccgacggcgtggatgtggtggtcgacgtcccg
aattcgtcggtggcgttggcggtgcaaggcatcgcccgcgaaaagaaaaaactcgttctg
gtctccagcgccggcacgacggcgttgagccaggcgcaatgctcgccatatggcgtgcag
tggacctacaccacctacgcgctgtcgcgcggtacggccaacgccgtggtcaaggaaggc
aataagcgctggttcatcctggcctccgattatgcgttcggcaaacagcttgccgccgat
accgaagccgtggtcaaggccgatggaggccaggtgctgggcacggtctaccatccgctt
aacgcgtccgatttcgcgtccttcctgctgcaggcgcaagcgtccaaggcgcagatcatc
ggtatcgcgaacgcgggcggagacaccatctcgacgatcaagcaggccgccgagttcggc
gtctccggtggcgggcagcaattggcagccatgctgctgctgctcaccgacgtgcacagc
ctgggcctgcaggccgcgcagaaaacctatctgaccgtgccgtcgtattgggacatgaat
gagggcacccgcaagttttccaaggacttccaggcccgcgtgggccatccgccaaccttc
ctgcaggccggtgtctatggttcggtgcgccattatctgcgcgcagtgcaggcggccggc
accacggacagcgatgccgtaatggccaagatgaaggcgctgcccatcgacgacgcgttc
agccagaacgcccgcatccgcgaggatggcctggtggtgcgcgacatgatgctggcgcag
gtcaaaacccccgagcagtccaagggcgcctgggactattacaacatcgtgcgcaccatc
cccggcgacaccctggtttggccgctgtccgaaagccaatgcccgctggtgaaaaaaccg
tga
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