KEGG   Bordetella holmesii 44057: D558_1065
Entry
D558_1065         CDS       T03379                                 
Name
(GenBank) autotransporter beta-domain protein
  KO
K12688  autotransporter serine protease [EC:3.4.21.-]
Organism
bhm  Bordetella holmesii 44057
Pathway
bhm05133  Pertussis
Brite
KEGG Orthology (KO) [BR:bhm00001]
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05133 Pertussis
    D558_1065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bhm02000]
    D558_1065
   02044 Secretion system [BR:bhm02044]
    D558_1065
Transporters [BR:bhm02000]
 Other transporters
  Pores ion channels [TC:1]
   D558_1065
Secretion system [BR:bhm02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   D558_1065
SSDB
Motif
Pfam: Peptidase_S8 Autotransporter PATR
Other DBs
NCBI-ProteinID: AIT25745
LinkDB
Position
complement(1014054..1016825)
AA seq 923 aa
MPPALPDLAADGRPAAPVPSAGYAKTAPSHFASAPGRAFNADHDRVLNLVNLKPAHDAGL
SGSRVKVAVVDTGVSLDHALLRVNTRHGGDYQANGTRSAANRANQGEHGSSVALVLAGRP
TASYRGGVAPDADLYSANIATAADRVSDGGAFHAWKDLLGHGMTIFNNSFTTDGPDGERR
VKQDQMEYQQAADKSQTQIGKLHELVKGGALLVFAAGNGSNVSGRGYQEVGSLGRTPLVE
PELQKGLLVVTAVDKFGDLERWSNRCGQARRWCLAASSQAYLPGIKTHDPNFFRVHQGTS
LAAPQVTGAAVLVKQRFGWMDNDNLRTTLLTTTQDKGRPGVDADYGWGLLDIGRAIEGPA
KFAFGDFVANVQGQSVFGNDISGAGGLTIDGPGLLTLAGHNTYAGATVIRQGTLDVLGSI
RSGTTVLEHGTLVGRGSVGAVDNHGTVAVKESGLTVNGDYHQHAQGRLVTDIGSALNVAG
KARLAGQLHVEGIRPGYVVAEGSVHTVVKAASIEGRFDTLTRAPNLLLQAQLDYQPQGVG
LAVRRAASVEAVARRLPSGADRVSVVAGARHLDAAMHALDALPQKQRQTTSAAASIARIQ
YAQNGIALRNSLYSLSGSIYANASALVTLGQSQWSDILQSRIALASPGGQPLAEYRRGRL
RWQPPGLDGHQRNNGLLAGITHEISPQLSVGAALAYDQGNWRESATAGAGSNAKATTTAA
LLGARRSWDSGWFVQTGLSYGHYRNRVERQLVLADVRQRAAGLARGQLWHAELGAGRRWQ
AWPGVGLTPSAGVAVSHLRQRRFRETSASGLGLHAAGLHRSVPTLWAHLQGDHALADAFA
LQWHLALHHDTRERRYAPRASFDGLGDPQDVSGHWPLPRTRLSLGLSAHAHLADGLALRL
RYTGQAASHWRDHHVGAALTYRY
NT seq 2772 nt   +upstreamnt  +downstreamnt
gtgccgcccgccctgcccgaccttgcagcggatggccgtcctgcggcgccggtcccatcc
gcgggctacgccaagaccgcgcccagccactttgcttccgcgccgggccgcgctttcaat
gccgaccacgaccgggtactcaacctggtcaacctcaaacccgcgcatgacgccggtctg
agcggctcacgcgtcaaagttgccgtcgtcgacaccggagtcagcctcgaccacgccctg
cttcgcgtcaacacgcgccacggcggggactaccaggccaatggcacacgcagcgcggcc
aatcgcgccaatcaaggcgagcacggcagttcggtggccctggtgctggccggccgcccc
accgccagttatcgcggcggcgtggcgcccgacgccgatctctattccgccaacatcgcc
accgccgcggaccgagtgtccgacggtggcgcgtttcacgcctggaaggatctgctcggt
cacggcatgacgatcttcaacaacagcttcaccaccgacggaccagatggcgagcgacgc
gtcaagcaagaccagatggagtaccagcaggccgccgacaaatcccaaactcagatcggc
aaactccatgagttggtcaaaggcggggcattattggtttttgccgcgggcaatggcagt
aacgtgtcggggcgcggctaccaggaagtgggcagcctgggacgcacgccactggtcgag
cccgaactgcagaaaggcctgctggtcgtcacggcagtagacaagtttggcgatctcgag
cgctggtccaatcgttgcggccaggccagacgctggtgcctggccgcaagcagtcaggcc
tatctgcccggcatcaagactcacgaccccaacttttttcgtgtccaccagggcacttcg
ctggctgcgcctcaggtcacgggcgcggccgtgctggtcaaacaacggtttggctggatg
gacaacgacaacctgcgcacgacactcctgaccacgacccaggataagggccgccctggc
gtggatgccgattacggctggggcttgctggacatcggacgggcaatagaaggccctgcc
aaatttgcctttggcgatttcgtcgcgaacgtgcaaggccaatcggtgttcggcaacgac
atctccggcgccggagggctgaccatcgatggcccgggcctgctcacgctcgccggccac
aacacttacgctggtgcgaccgtcattcgccagggcacgctggacgtcctgggcagcatc
cgctcgggcaccaccgtactcgagcacggcacgctcgtgggccggggcagcgtcggcgcc
gtcgacaatcacggcaccgtcgccgtcaaggaatccgggctcaccgtcaacggcgattac
caccagcacgcgcaagggcggctggtcaccgacatcggcagcgcgctcaatgtcgcgggc
aaggcgcgcctggccgggcaactccatgtcgaaggcattcgtccgggctatgtggtggct
gaaggcagcgtgcacaccgtcgtgaaggctgcctcgatcgagggccgcttcgacacactc
acccgcgcgccgaacctgctgctgcaggcgcagttggactatcaaccccaaggtgtcggc
ctggccgtgcgacgcgcggcctcggtcgaggcggtagcgcggcggctgccctctggagcc
gaccgcgtgtctgtcgtcgctggagcgaggcacttggacgccgccatgcatgcgctcgat
gccctgccccaaaaacagcggcagaccacgtcggcagccgcctcgatcgcgcggatccaa
tatgctcaaaatggcatcgcgttgcgcaacagcctctactcgctatccggcagcatctac
gccaacgcctcggcactcgtcaccctgggacagagccagtggtcagacatcttgcaatcc
cgaatcgccctggcctcgccaggcggccagccgctggcagaataccgtcgcggcagacta
cgctggcaaccccctggccttgacggccaccagcgcaacaacggcttgctggccggcatc
acccacgagatcagcccgcaactgagcgtgggcgcagccttggcctacgaccagggcaac
tggcgtgagtccgccaccgcaggcgccggcagcaatgccaaggccaccaccacggccgcc
ttgctgggcgcgcgcaggtcctgggactccggatggtttgtgcagacggggctgagttac
ggccactatcgcaaccgcgtcgagcggcaactcgttctggccgatgtgcgccaacgtgcg
gcgggcctggcgcgcggccagctctggcacgccgagctcggtgcgggcagacgctggcag
gcctggcctggcgtggggctcacaccatcggcaggtgtagccgtcagccatctgcgccaa
cgccggtttcgcgaaaccagcgcatcggggctgggcctgcacgctgccggcctgcatcga
agcgttcccacgctttgggctcatctgcagggtgaccacgccctggccgacgcgttcgcg
ctgcaatggcacctggccctgcatcacgacacgcgggaacgccgttatgcaccgcgcgcc
agcttcgatgggcttggcgaccctcaagacgtcagcggccactggcccctgccacgcact
cgtctgtcgttggggctgagcgcacacgcccacctggccgacgggcttgccttgcgtctg
cgctacaccggccaggccgcaagccactggcgggaccatcacgtcggcgcggccctcacc
taccgttactag

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