Bordetella holmesii 44057: D558_1126
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Entry
D558_1126 CDS
T03379
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm00730
Thiamine metabolism
bhm01100
Metabolic pathways
bhm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D558_1126 (thiC)
Enzymes [BR:
bhm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
D558_1126 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AIT25804
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Position
1076336..1078249
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AA seq
637 aa
AA seq
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MNANPKFLAATAEVDAAAVAPLPKSRKIYEIGSRPDIRVPFREIEQHDTPTMFGGEHNPP
LTVYDTSGPYTDPQVTIDIRRGLQELRRGWIDERGDVEVLDGPSSEYGRGRLEDPKLTAM
RFDLRRPPRRAKTGANVTQMHYARRGIVTPEMEYVAIRESLRREHYLESLRASGPEGEKM
ARRLMRQHPGQSFGAAIPKAITAEFVRDEIARGRAIIPANINHPEVEPMIIGRNFLVKIN
ANIGNSAVSSGIGEEVEKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGAVPIY
QALEKVDGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLPFIPMTADRMTGIVSRGGS
IIAKWCLAHNKESFLYERFEEICEIMKAYDVSFSLGDGLRPGSGYDANDEAQFAELKTLG
ELTQVAWKHDVQVMIEGPGHVPMQMIKENMELQLEHCHEAPFYTLGPLTTDIAPGYDHIT
SGIGAAIIGWYGTAMLCYVTPKEHLGLPNKKDVKDGIITYKIAAHAADLAKGHPGAAVRD
NALSKARFEFRWDDQFNLGLDPDTAREFHDETLPKDSMKVAHFCSMCGPHFCSMKITQDV
REYAASQGLSEQQALSQGMQEKAIEFVKKGAEVYHRN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaacccgaagttcctggccgccacggccgaggtcgacgccgcggccgtcgcc
ccgcttcccaaatcccgcaaaatctacgaaatcggctcgcggcccgatattcgcgtgcct
tttcgcgaaatcgagcagcacgacacgcctacgatgttcggtggcgagcacaacccgccc
ctgaccgtctacgacaccagcggcccctacaccgacccgcaggtcacgatcgacatccgc
cgcggcctgcaagaactgcgccgcggctggatcgacgagcgtggcgacgtggaggtcctc
gacggcccgagcagtgaatatggccgcggccgcctggaagaccccaaactgacggcgatg
cgtttcgatttgcgccgcccgccgcgccgcgccaaaaccggcgccaacgtcacgcagatg
cattacgcccgccgcggcatcgtcacgccagagatggagtacgttgccatccgcgagagt
ctgcgccgcgaacactatctggagtcgctgcgcgccagcggccccgagggtgagaaaatg
gcccgccgcctgatgcgccaacacccggggcagtcatttggcgccgcgatcccgaaggcc
atcaccgcggaattcgtacgcgacgaaatcgcgcgcggccgcgccatcatcccggccaat
atcaaccatccggaagtcgaaccgatgatcatcggacgcaacttcctggtcaagatcaat
gccaatatcggtaactcggcggtcagttcgggcatcggcgaagaggtcgaaaaaatgacc
tgggccatccgctggggcggcgataccgtcatggacctgtccaccggcaagcacatccac
gagacacgcgaatggatcattcgcaattcgcccgtgcccatcggtgccgtgcccatctac
caggcgctggaaaaagtcgacggcaaggccgaagacctgacctgggagattttccgcgac
acgctgatcgagcaggccgaacaaggggtggactacttcactatccacgccggcgtccgc
ctgcccttcatccccatgacggccgaccgcatgacgggcatcgtctcgcggggcggctcc
atcattgccaagtggtgtctggcgcacaacaaggagagcttcctctatgagcgtttcgag
gaaatctgcgaaatcatgaaggcctatgacgtgagcttctcgcttggcgacggcttgcgc
cccggctcggggtatgacgccaatgacgaggcgcagttcgccgaactcaagacgctgggc
gagctgactcaggtcgcctggaagcacgacgtgcaggtcatgatcgaaggcccgggccac
gtgcccatgcagatgatcaaagaaaacatggagctgcagctcgaacactgtcacgaggcg
ccgttctacacgctcggcccgctgaccaccgacatcgctccgggctacgaccacatcacc
tcgggcatcggcgcggcgatcatcggctggtatggcacggccatgctctgctacgtcacc
cccaaggagcacctgggcctgcccaataaaaaggacgtcaaggacggcatcatcacctac
aagattgccgcccacgccgccgacctggccaagggccatccgggtgcggccgtgcgcgac
aacgcgctgtcgaaggcacgctttgaattccgctgggacgatcagttcaatctcgggctg
gatccggacaccgcgcgggagttccacgacgagacgctgcccaaagactcgatgaaggtg
gcgcacttctgctcgatgtgcggcccgcatttctgcagcatgaagatcactcaggacgtg
cgcgaatacgccgcgagccaaggtctgtcggagcaacaggccttgagtcaaggcatgcag
gaaaaagccatcgagttcgtgaaaaaaggtgcagaggtctatcaccgcaactaa
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