Bordetella holmesii 44057: D558_1254 Help Entry D558_1254         CDS       T03379                                  Symbol dapF Name (GenBank) diaminopimelate epimerase   KO K01778   diaminopimelate epimerase [EC:5.1.1.7] Organism bhm  Bordetella holmesii 44057 Pathway bhm00300   Lysine biosynthesis bhm00470   D-Amino acid metabolism bhm01100   Metabolic pathways bhm01110   Biosynthesis of secondary metabolites bhm01120   Microbial metabolism in diverse environments bhm01230   Biosynthesis of amino acids Module bhm_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine Brite KEGG Orthology (KO) [BR:bhm00001]  09100 Metabolism   09105 Amino acid metabolism    00300 Lysine biosynthesis     D558_1254 (dapF)   09106 Metabolism of other amino acids    00470 D-Amino acid metabolism     D558_1254 (dapF) Enzymes [BR:bhm01000]  5. Isomerases   5.1  Racemases and epimerases    5.1.1  Acting on amino acids and derivatives     5.1.1.7  diaminopimelate epimerase      D558_1254 (dapF) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DAP_epimerase CPT Motif Other DBs NCBI-ProteinID:  AIT25932 LinkDB All DBs Position 1194559..1195437 Genome browser AA seq 292 aa AA seqDB search MIWNFTKMHGAGNDFVVLDGVRQTIEMTPERARALGDRHFGVGADQILLVERPTRPDADF RYRVFNNDGSEVEHCGNGARCFVRFVHEQGLSEKNPLRAEIVSGVILLDESEDGQVTVDM GSTCFDPAALPFDAHGLTQRSQGQDTLYTLPLDGAEVEISTVAISNPHAVQVVADVATAA VARLGPQIESHPRFARRVNAGFMQIIDRHAIALRVYERGAGETLACGTGACAAVAAGIRG GLLDSPVRVQTRGGVLTIAWDGAQLRMTGPAQSVFHGQIDIDKLVFSMALNR NT seq 879 nt NT seq  +upstreamnt  +downstreamnt atgatctggaacttcaccaaaatgcatggcgccggcaacgacttcgtcgtgctcgacggc gttcgccaaaccatcgagatgacgccggagcgcgcgcgcgctctgggcgaccggcatttc ggcgtcggcgccgaccagatattgctggtcgagcggcctacccgccccgacgccgacttt cgctaccgggttttcaacaatgacggcagcgaggtcgagcattgcggcaacggcgcgcgc tgcttcgtgcgctttgtgcacgagcagggcttgagcgagaagaacccgctgcgcgcggag atcgtcagcggcgtcattctgctcgacgaaagcgaagacggacaggtaaccgtggatatg ggatcgacgtgcttcgatccggcggcgctacccttcgatgcccacggcctgacccagcgc tcgcaggggcaggatacgctctacaccctgccgcttgacggcgccgaggtggaaatctcg accgtggccatttccaacccgcacgccgtgcaggtggtcgccgatgtcgccacagcagcc gtggcccgtctgggcccgcaaatcgaatcgcatccccgctttgcgcgccgcgtcaatgcc ggtttcatgcagatcatcgaccgccacgccatcgcgctgcgcgtctacgaacgcggcgcg ggcgagaccctggcttgcggcaccggggcctgcgcggccgtggctgccggcatccgcggc ggcctgctcgacagtcccgtgcgcgtgcaaacccgcggcggcgtgctgaccattgcctgg gacggcgcccaactgcgcatgaccggcccggcccagtccgtattccatggccagatcgat atcgacaaactggtcttttccatggcgctgaatcgctga

DBGET integrated database retrieval system