Bordetella holmesii 44057: D558_1588
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Entry
D558_1588 CDS
T03379
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhm03021
]
D558_1588 (rpoH)
Transcription machinery [BR:
bhm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D558_1588 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AIT26260
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Position
1506158..1507045
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AA seq
295 aa
AA seq
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MNSASPSLATSGNALALAVANPGALGTIDAYISTVNRLPVLTLEQESSLARRLRDGDDLE
AARELVLSHLRLVVSVARQYLGYGLPHADLIQEGNVGLMKAVKRFDPERGVRLVSFAVHW
IKAEIHEYIIRNWRLVKVATTKAQRKLFFNLRSMRPDGQTLDTEQVDRIARELNVRREDV
SEMEVRLSGRDLSLENQDDDDDSYAPIAYLSDECREEPTRVLERKARDDLQGQGLADAIK
ALDARSRRIVEARWLQDDGGATLHELAAEFGVSAERIRQIEAAALKKMRGTLAAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagccagtccctcgttggccacctcgggcaacgccttggccttggcggttgcc
aatcccggtgcgttgggcacgatcgatgcctatatttcgacggtcaatcgcctgccagtt
ctcacgctcgagcaagagtcctcgctggcgcgccgtctgcgcgatggtgacgacctcgaa
gccgcccgcgaactggtgctgtcgcacctgcgcctggtggtgtcggtcgctcgtcagtac
ctggggtacggattgccgcatgccgacctcatccaggaaggcaatgtcggcctgatgaag
gccgtcaaacgtttcgaccccgagcgcggggtgcgtctggtttcctttgccgtgcattgg
atcaaggccgaaatccacgaatacatcatccgcaattggcgcctggtcaaagtggccacc
accaaggcccagcgcaagctgttcttcaatctgcgcagcatgcgcccggatggtcagacg
ctcgataccgagcaggtcgaccgtatcgcccgcgaactcaacgtccgccgcgaggatgtc
agtgagatggaggttcgcctgtcgggccgcgatctttcgctcgagaatcaggacgatgac
gatgacagctatgcgcccatcgcgtatctgtcggacgaatgccgcgaagagcccacccgt
gtgcttgagcgcaaggcgcgcgatgatttgcagggccagggcctggccgatgccatcaag
gcgctggatgcgcgctcgcgccgcatcgtcgaagcccgttggctgcaggacgacggcggt
gccacgctgcatgaactcgccgcggagttcggggtgtcggccgagcgcatccgccagatc
gaggcggcggcgctgaaaaaaatgcgtggcacgctggcggctgcctga
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