Bordetella holmesii 44057: D558_1703
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Entry
D558_1703 CDS
T03379
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm00630
Glyoxylate and dicarboxylate metabolism
bhm00680
Methane metabolism
bhm01100
Metabolic pathways
bhm01120
Microbial metabolism in diverse environments
bhm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D558_1703
09102 Energy metabolism
00680 Methane metabolism
D558_1703
Enzymes [BR:
bhm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
D558_1703
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Motif
Pfam:
Molybdopterin
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AIT26375
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Position
1609384..1611813
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AA seq
809 aa
AA seq
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MTNHWVDIKNADVVLIMGGNAAEAHPCGFKWVTEAKAHNKAKLLVVDPRFTRSASVADFY
APIRTGTDIVFLGGVIHYLLENDKVQHEYVRNYTDFSFIVREDFAFEDGIYSGYNPEKRS
YDKASWDYERGEDGFVKTDPTLQHPRSVYQLLKQHYARYTPEMVERVCGTPVDKFHHVCE
TLASTATTDRAATILYALGWTQHSIGSQIIRTGAMLQLLLGNIGVAGGGMNALRGHSNIQ
GLTDLGLISNLLPGYMTLPNEGEQDFGKYIDVRAQKPLRPNQLSYWQNYKKFHVSLMKAW
WGAAATAENNWGYDYLPKLDKLYDMLQTYELMNQGKVNGYICQGFNPLAAAPNKAKMTAG
FSKLKFLVIMDPLATETSEFWRNVGEHNDVDSSKIQTEVFRLPTTCFAEEEGALVNSGRW
LQWHWKGAEPPGEARSDIEIMSDLYTRMREMYRKDGGVYPDPIVNLSWPYSNPESPTAVE
LAKEYNGRALVDLTDPKDPTRVTRKGGEQLAGFAELRDDGTTASGCWIFAGAWTEAGNLM
ARRDNSDPTGIGQTLNWAWAWPANRRVLYNRASCDVEGKPFNPRRSLISWNGKAWTGADI
PDFKGDENPAGGMGPFIMNPEGVARFFARGGMAEGPFPEHYEPFENPLGYNPLHPKQPLA
ISNPAARVFKSDLEAMGRVEDFPYVATTYRLTEHFHYWTKNVRLNAILQPEQFVEIGEAL
AKELGIANGSRVRVSSKRGHITAVALVTKRIKALTVEGRTVHQVGIPIHWGFVGIAKPGF
LANTLTPFVGDGNSQTPEFKSFLVKVEKA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccattgggtcgacatcaagaatgcggatgtagtgctgatcatgggtggcaat
gccgccgaggcccacccttgcgggttcaaatgggtcacggaagccaaagcccataacaaa
gccaaattgctggtcgtggacccgcgctttacgcgctcggcgtccgtggcggatttctac
gcgcccatacgtaccggaacggatatcgtctttctgggtggggtgatccattacctgctc
gaaaacgacaaggtccagcacgagtacgtacgcaactacaccgacttctcgttcatcgtt
cgcgaggacttcgcgttcgaagatggcatctactcgggctacaaccccgagaagcgcagt
tatgacaaagcctcgtgggattacgagcgcggtgaggacggcttcgtcaagaccgacccg
acactgcagcacccgcgctcggtctaccagttgctcaagcagcactatgcgcgctatacg
cccgagatggtcgagcgcgtctgtggcacgccggtggacaagttccatcacgtctgcgag
acactcgcgtcgacggccacgaccgatcgggcagccaccatcctgtatgcactgggctgg
acgcaacactccatcggctcgcagatcattcgcaccggcgccatgctgcaactgctgctg
ggcaatatcggcgtggctggcggtggcatgaatgcgctgcgcggccactccaacatccag
gggctgaccgatctggggttgatatccaatctgctgccgggctacatgacgctgcccaat
gagggcgagcaggatttcggcaagtacatcgacgtacgtgcgcaaaagccgctgcgcccc
aaccagttgagctattggcagaattacaagaagttccacgtcagcctcatgaaggcctgg
tggggcgcagccgccacggcggaaaacaactggggctacgactatctgcccaagctggac
aagctctacgacatgctgcagacgtacgagctgatgaatcagggcaaggtcaatggctat
atctgccagggcttcaatccgcttgccgccgcgcccaataaagccaagatgaccgcgggc
ttctccaagctcaagttcctggtcatcatggatccgctggccaccgaaacgtcggaattc
tggcgcaacgtgggcgagcacaacgacgtcgattcgagcaagatccagactgaagtcttc
cggttgcccaccacctgttttgccgaggaagaaggcgcattggtcaattccggccgctgg
ttgcagtggcattggaagggggccgagcctccgggcgaggcgcgcagcgatatcgagatc
atgtccgatctctatacccgcatgcgcgagatgtatcgcaaggatggcggcgtttatccc
gatcccatcgtcaacctgtcctggccgtattccaatccggaaagccccactgcggtggag
ttggccaaggagtacaacggccgtgcgctcgttgacctgaccgaccccaaggatcccacc
cgcgtgacgcgcaagggcggcgagcagttggccgggtttgccgaattgcgcgacgacggt
acgaccgccagcggctgctggattttcgcgggtgcctggaccgaggccggcaacctcatg
gctcgccgcgacaatagcgatcccaccggcatcgggcagaccctgaactgggcctgggcg
tggccggccaatcgccgggtgctctataaccgtgcgtcctgcgacgtcgaaggcaagccc
ttcaatccgcgccgcagcctgatctcctggaacggcaaggcctggacgggtgccgatatt
ccggacttcaagggcgacgagaatcctgccggtggcatgggtcctttcatcatgaacccc
gagggtgtggctcgctttttcgcccgcggcggcatggccgaaggccccttccccgagcac
tacgagcccttcgagaatccgctgggttacaacccgctgcatcccaagcagccgttggcc
atcagcaatccggccgcgcgcgtgttcaagtcggacctcgaagccatgggccgagtggag
gactttccgtatgtggccaccacctaccgcctgaccgagcatttccattactggaccaag
aacgtcaggctcaatgccatcctgcagcccgagcaattcgtcgagatcggcgaggcgctg
gccaaggaactgggcatcgccaacggttcacgagtgagagtctcgtccaaacgcggccat
atcacggccgtggcgctggtgaccaagcggatcaaggcgctgaccgtcgaaggccgcacc
gtgcaccaggtgggcattcccattcactggggcttcgtggggatcgcaaaacccggcttt
ctggccaatacgctgacgcctttcgtgggcgacggcaatagtcagacgcccgagttcaag
tccttcctggtcaaggtcgagaaggcatag
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