Bordetella holmesii 44057: D558_1811
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Entry
D558_1811 CDS
T03379
Symbol
rlpA
Name
(GenBank) rare lipoA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bhm01011
]
D558_1811 (rlpA)
Enzymes [BR:
bhm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
D558_1811 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
bhm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
D558_1811 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AIT26481
LinkDB
All DBs
Position
complement(1707580..1708497)
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AA seq
305 aa
AA seq
DB search
MRSPRALMMLLLLAVVLAGCSTPGKRGGGYYKDDGPDANPPANLDSIPDAVPRLEPLASG
ANRPYVVFGKRYVPDLTEQAFRQEGIASWYGKKFHGNSTSIGEPYDMYSMTAAHPTMPVP
SYARVTSKVNGRSVIVRVNDRGPFHSDRIMDLSYVAAHKLGIIGPGSGAVVVERILPSEI
RTMMANGGAASAVNGMEPVALADLPAATPTALPLPAPSPQASPPARRAAPGSIYLQLGAF
SQAANAHNVVNKVNGMMTGEPAATVEPANSLYRVRMGPYASREAALEAVRRVSDRTGILP
SLAAQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgccgcgtgccctgatgatgctgttactgctggccgtcgtgctggcaggttgc
agcaccccaggcaagcgcggtggcgggtactacaaggatgacggtccggatgccaacccg
ccggccaacctggacagcatccctgacgccgtaccccgcctggagcctctggccagcggt
gccaaccggccctatgtggtgttcggcaaacgctatgtgccggacctgactgagcaagct
tttcggcaggaaggcatcgcatcctggtacggcaaaaaattccacggcaactcgacgtcc
atcggcgagccttacgacatgtacagcatgacggcagcgcacccgaccatgccggtgccc
agctatgctcgggtgaccagcaaggtaaacggccgcagcgtgatcgtgcgggtcaacgac
cgtggcccctttcacagcgaccgcatcatggatctgtcctatgtggccgcccacaagctg
ggcatcatcggcccaggcagcggtgcggtcgtggtcgaacgcattctgcccagcgaaatc
cgcacgatgatggccaatggcggcgccgcgtctgcggtcaacggcatggagcccgtcgct
ctggccgatctgccggcagccacacccacggccctgccgttgcctgccccatcgccccag
gcttcgcctcctgcgcggcgcgccgccccgggcagcatttatttgcaactgggcgcgttc
agccaggcggccaacgcgcacaacgtagtgaataaagtcaacggcatgatgacgggcgaa
ccggccgccacggtcgagccggccaactcgctgtatcgcgtacggatggggccgtatgcc
tcgcgcgaggctgcgctcgaggccgtcaggcgtgtctccgatcgcaccggaattttgccc
agcctggctgcgcaataa
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