KEGG   Bordetella holmesii 44057: D558_1885
Entry
D558_1885         CDS       T03379                                 
Symbol
mutY
Name
(GenBank) A/G-specific adenine glycosylase
  KO
K03575  A/G-specific adenine glycosylase [EC:3.2.2.31]
Organism
bhm  Bordetella holmesii 44057
Pathway
bhm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bhm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    D558_1885 (mutY)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bhm03400]
    D558_1885 (mutY)
Enzymes [BR:bhm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.31  adenine glycosylase
     D558_1885 (mutY)
DNA repair and recombination proteins [BR:bhm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     D558_1885 (mutY)
 Prokaryotic type
     D558_1885 (mutY)
SSDB
Motif
Pfam: HhH-GPD NUDIX_4 HHH EndIII_4Fe-2S HHH_5
Other DBs
NCBI-ProteinID: AIT26555
LinkDB
Position
complement(1779552..1780640)
AA seq 362 aa
MEFAALIADWQARHGRHRLPWQNTRDPYRIWLSEIMLQQTQVATVIPYFERFLGRFPDVA
ALAAASQEDVMPYWAGLGYYARARNLHRCAQDIVARWAGRFPPDAQTIATLPGIGRSTAA
AIAAFAYGERSPIMDGNVKRVFTRHFGIEGDPSKRELEQRLWRLAEDLVSAVPGLDMTAY
TQGLMDLGATLCTRGKPACDRCPVAASCIARRDGRQQELPTPKTRRAVPERQTAMLVLEH
DGAIFLQQRPSPGIWGGLWSLPEFDAGGDARLACRALGLEPQTHYELAAFAHTFSHYRLH
VRPWYVTAAPAGLRAGTLPERWVPSNELNAIALPAPIKKLLLGLAEAGLPGTLPLQPSIL
DR
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggaattcgccgctctcatcgccgactggcaggcccgccacggccgccaccgcctgcct
tggcagaacacccgggatccctaccgcatctggctgtcagagatcatgctgcagcaaacc
caggtcgccacggtcatcccttatttcgaacgctttctcggccgattccccgacgtcgcg
gcgctggccgccgccagccaggaagacgtgatgccgtattgggctggcctggggtattac
gcccgagcacgaaatctgcatcgttgtgcgcaggacatcgtggcgcgctgggcgggccgc
ttcccgccagatgcgcagaccatcgccacgctgcccggcatcgggcggtccactgcggcg
gccattgccgcctttgcttatggcgagcgctcgcccatcatggacggcaacgtcaagcgc
gtcttcacgcgccatttcggtatcgagggcgatccgtccaaacgcgagcttgagcagagg
ctatggcgcctggctgaagacctcgtcagcgctgtgcccggcctggacatgacggcctac
acacaaggattgatggacctgggcgcgacactgtgcacacgcggcaagcctgcctgcgac
cgctgcccggttgctgcatcctgtatcgcgcgccgcgacgggcgccagcaggagctcccc
acccccaagacacgccgagccgtgcccgagcggcaaaccgccatgctggtgctagagcat
gacggcgcaatatttctgcagcagcggccgtcgccaggaatatggggagggctgtggagc
ctgccggagttcgacgccggcggcgacgccaggctggcctgccgcgcgctcggcctggag
ccgcaaacccattacgaactggccgccttcgcgcatacgttctcgcattaccggctgcac
gttcgtccctggtacgtgacggccgccccggctggcctgcgtgccgggacgctgcccgaa
cgctgggtgccgtcaaacgagctcaacgccatcgcgctgccggctcccatcaaaaagctg
ttgctcgggctggccgaagccgggctgcccggcacgctgccgctgcaaccctcgatcctg
gatcgctag

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