Bordetella holmesii 44057: D558_2072
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Entry
D558_2072 CDS
T03379
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm03030
DNA replication
bhm03430
Mismatch repair
bhm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D558_2072 (dnaQ)
03430 Mismatch repair
D558_2072 (dnaQ)
03440 Homologous recombination
D558_2072 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhm03032
]
D558_2072 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bhm03400
]
D558_2072 (dnaQ)
Enzymes [BR:
bhm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D558_2072 (dnaQ)
DNA replication proteins [BR:
bhm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D558_2072 (dnaQ)
DNA repair and recombination proteins [BR:
bhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D558_2072 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AIT26740
LinkDB
All DBs
Position
1954747..1955481
Genome browser
AA seq
244 aa
AA seq
DB search
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRGVTGRNLHIYLNPDRGSDPEALAVHGLT
TEFLSDKPRFGEVAAQFLAFIDGAELIAHNAGFDVKFFNAELQKAGLKTLDNYCGSVVDS
LAHARTLYPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVD
DAQGGGGSQVELSRFDASVLPVIAASAEDLAAHEAYLAALDKSVGAACLWRTLDEASGAP
AQAA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagatcattttcgataccgaaaccaccggcctggatcccgcccagggtcaccgc
atcgtggaaattggctgcgtcgagatcgtcaatcgcggggtgaccgggcgcaacctgcac
atctacctcaatccggaccgcggcagcgatcccgaagcgttggccgtgcacggtttgacg
accgagttcctctccgataagccacgttttggcgaggtggccgctcaatttctcgccttc
atcgatggcgcggaactcatcgcgcacaacgccgggttcgacgtgaaattcttcaacgcc
gaactgcagaaggccggactcaagaccctggacaactattgcggcagcgtggtggattcg
ctggcacatgcgcgcacgctctatcccggcaagcgcaattcgctcgacgccttgtgcgac
cgctacggcatctccaacgcgcaccgcactctgcacggcgccttgctggactcgcagttg
ttggccgaggtctggctggccatgacacgcggccaggacgccttgctgatcgacgtcgat
gatgctcagggcggcggtgggtcccaggtcgaactcagccgcttcgatgcctccgtgcta
cccgtcatcgccgcctctgcagaggatcttgccgcgcacgaagcctatctcgcggccctg
gacaaatctgtcggcgcagcctgcctttggcgcacgctcgacgaggcttcgggcgcgccc
gctcaggctgcttga
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