Bordetella holmesii 44057: D558_2229
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Entry
D558_2229 CDS
T03379
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhm03036
]
D558_2229 (smc)
Chromosome and associated proteins [BR:
bhm03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
D558_2229 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AIT26890
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All DBs
Position
2100251..2103781
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AA seq
1176 aa
AA seq
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MRLTQLKLAGFKSFVDPTVIPVPSQLVGVVGPNGCGKSNIIDAVRWVLGEAKASELRGES
MQDVIFNGSGNRKPAARASVEMVFDNSEGRAAGQWSTYSEIAVRRVLTRDGTSSYYVNNQ
QVRRRDIHDIFLGTGLGARGYAIIGQGMINRLIEARPEELRVFLEEAAGVSRYKERRRET
ENRLSDTRENLTRLEDILRELGSQLEKLEAQAEVARQYRDLQADGEKKQFALWFLKESGA
REERDRKGQEMAQAQNHLEAAIAQLRAGEAALESRRQAHYAASDAVHQAQGLLYEANAQV
SHLEAEIRHVVDSRNRLQARRDQLQAQIEEWNSQQEHCTEQIAAAEDDLTTAAARTEEAR
AAAEDAQDGLPAIEARVREAAAGRDEMRVALARVEQNLALAAQTQRDADRQIQALEQRRE
RLQQELRELHTPDVARLEQLAGDRYAGEEQLQAAQAELTALEGRVPEADTARSQAQSAAQ
QQAQALARLDARLAALVKLQEDVQKQGALEPWLAKHELASLGRLWQKLHVETGWEAALEA
ALRERMAALEVRNLDWTRAFADDAPPARLAFYQTPAASAAPVAAAGLTPLASLLRITDPD
LRALLTEWLRGVYVAPDFAQALGARATLPAGAAFVVKAGHLVDAHGVRFYAPDSEQAGML
ARQQEIENLQREIKAQQLIADQSRSAVARAELAWQQVSQALGPARQRVGELTRRLHDVQL
EHSRLQQQAEQSGERARRLREDLQELAAQEEDLRATREEAEARFETLDTELAEHQGRFSD
AEIDGESIAASAEAARARLRELERGAQEAEFAERGIQVRITDLQRNRQLALDQSQRAGSE
LAQLEVELSELDASATQAGLQDALEQRVEREEALSLARQELDNLSALLRGADEDRLQQER
LLEPLRARITELQLQEQAARLAEEQFTEQLNAREVDRQTLAQELASMPEEWRRASWLQSE
VGKISRQIEALGSVNLAALDELSTSRERKTFLDSQQQDLLTAIETLEDAIRKIDRETREL
LQETFNTVNGHFGELFPKLFGGGEAKLTMTGDEILDAGVQVMAQPPGKRNSTIHLLSGGE
KALTATALVFALFKLNPAPFCLLDEVDAPLDDANTERYANLVSNMSEQTQFLFISHNKIA
MQMAKQLVGVTMQEQGVSRIVAVDIDSAVQMAAEAA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccttacccaactcaaactcgccggtttcaaatcttttgtcgatcccacggtgatc
cccgtgcccagccaactggttggcgtggtgggtccgaacggctgcggcaagtccaatatc
atcgacgcggtgcgttgggtgctgggcgaggccaaagcctccgagctgcgtggcgaatcc
atgcaggacgtcattttcaacggctccggcaaccgtaaaccggccgcgcgcgcctcggtt
gaaatggtgttcgacaatagcgagggccgggctgccggccaatggagcacctattcagag
atcgccgtgcggcgcgtgctgactcgcgatggcaccagtagctactacgtcaataatcag
caggtccgccgccgcgacatccatgacatcttcctgggcacgggcctgggcgcgcgcggg
tacgccatcatcggtcaaggcatgatcaatcgcctgatcgaggcgcgccctgaagaactg
cgggtgttcctcgaagaggcggccggcgtgtcgcgctacaaagagcgtcggcgcgaaacg
gaaaaccgcctctcggacacgcgcgaaaacctgacccggctcgaagacattctgcgcgag
ctgggcagccagttagagaagctcgaggcgcaggccgaggttgcgcgtcagtatcgcgac
ctgcaggccgatggtgagaaaaaacaatttgcgctctggttcttgaaagagagcggagcg
cgcgaagagcgcgaccgcaaaggccaggaaatggcgcaggcgcagaaccacctggaggct
gccatcgcccagctgcgagccggtgaagctgcgctggagtcgcgccgccaggcccactac
gccgccagcgatgccgtgcaccaggcccagggcctgctctatgaggctaatgcccaggtc
agccacctcgaggccgagatccgccatgtcgtggactctcggaatcgtcttcaggcccgg
cgcgatcagttgcaagcccagatcgaagaatggaacagccagcaggagcactgcaccgag
cagatcgcggcggccgaggacgacctgaccacggctgcggcacgcaccgaggaggcgcgc
gcggcggccgaggacgcccaggacgggttgccggcgattgaggcgcgtgtgcgcgaggct
gcggccgggcgcgatgaaatgcgcgttgcgctggcgcgggtcgagcagaaccttgctctg
gcggcccagacgcagcgcgacgccgatcgccagatccaggcgctggagcagcgtcgcgag
cgtctgcagcaggaactgcgcgaactgcatacccccgacgtggcgcgcttggagcagctc
gctggtgatcgttatgccggtgaggaacaattgcaggccgctcaggctgagctcacggcc
ctcgaaggccgcgtacccgaggcagacactgcgcgcagccaggcccaaagcgccgctcag
cagcaagcccaagccctggcgcgtctggatgcccgcctggctgctctggtgaagttgcaa
gaagacgtgcaaaagcagggggcgttggagccctggctggccaagcatgagctcgccagt
cttggccgcctgtggcagaaacttcatgtggaaaccggatgggaggctgcgctggaagcg
gccttgcgtgagcgcatggccgctctcgaggtgcgcaacctggactggactcgggctttc
gccgacgatgccccgcctgcccggttggcgttctatcagacgccggcagcgtctgcggct
ccggttgccgccgcagggctcacgcctctggccagtctgctgcgcatcaccgacccggat
ctgcgcgcgttgctcacggaatggctgcgtggcgtgtatgtcgccccggatttcgctcag
gccctgggcgctcgggcgacactgccagccggcgcggcctttgtggtcaaagccggccac
ctggtcgatgcccacggcgtgcgcttttatgctccggactccgagcaggctggtatgctg
gcccgccaacaggaaatcgaaaatctgcagcgcgagatcaaagcgcagcagttgatcgcc
gaccagtcgcgcagcgccgtagcgcgcgcggaactggcctggcagcaggtgtcccaggcc
ttggggcctgctcgccagcgggtcggcgaattgacgcgccgcctgcatgacgtacagctt
gagcactcacgtctgcaacagcaggccgagcaatccggcgagcgcgcccggcggcttcgt
gaagatctccaggagctggctgcccaggaagaagacctgcgtgccacgcgcgaggaggcc
gaggcgcgcttcgagacgctcgacacggagttggccgaacatcagggacgcttttccgat
gccgaaatcgatggagaaagcatcgcggcgtcagccgaagccgcccgggcccgactgcgc
gagctcgagcggggggctcaggaagccgagtttgccgagcgcggtatccaggttcgtatt
acggatctgcagcgtaaccggcaattggccctggatcagagccagcgcgccggtagtgag
cttgcacagttggaggtcgaactctccgagttggatgcgtcggcgacccaggcaggtctg
caggacgcgctcgagcagcgcgtcgagcgtgaagaggccctgtcgctggcgcgccaggag
ttggacaatctgtcggccctattgcgcggcgccgacgaggatcgcttgcagcaggagcgg
ttgctggagcctttgcgggcccggattaccgagttgcaactgcaggagcaggccgccaga
ctggccgaagaacagttcaccgagcagctcaatgcacgcgaagtggaccgccagaccctg
gcacaggaactcgcttccatgccggaagagtggcggcgcgccagttggctgcagtcggaa
gttggcaagatttcacgccagatcgaagctctgggatccgtcaatctggcggccttggat
gagttgagcacgtcgcgagagcgcaagaccttcctggattctcagcagcaggatctgttg
acggccatcgagaccctcgaggacgccattcgcaagatagaccgtgaaacccgtgagctg
ttgcaggaaaccttcaatacggtcaacggccatttcggcgagctctttcccaagctcttt
ggcggcggcgaggccaagctcaccatgacgggcgatgaaattcttgatgccggggtgcag
gtcatggcgcaaccgcctggcaagcgcaacagcaccattcatctgttgtccggcggcgag
aaagccctgaccgcaacagcactggtgttcgctttgttcaagctcaacccggcgccgttc
tgcctgctcgatgaggtggacgcgcccttggatgatgccaacactgagcgatatgccaac
ctcgtgagcaatatgagtgagcagactcagttcctattcatctctcacaataagatagcc
atgcagatggccaagcaattggtcggcgttaccatgcaggaacaaggggtttcgcgtatc
gttgccgtagatatcgattcggccgtgcagatggccgccgaagccgcttaa
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