Bordetella holmesii 44057: D558_2303
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Entry
D558_2303 CDS
T03379
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
D558_2303 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhm03019
]
D558_2303 (rnc)
03009 Ribosome biogenesis [BR:
bhm03009
]
D558_2303 (rnc)
03036 Chromosome and associated proteins [BR:
bhm03036
]
D558_2303 (rnc)
Enzymes [BR:
bhm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
D558_2303 (rnc)
Messenger RNA biogenesis [BR:
bhm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D558_2303 (rnc)
Ribosome biogenesis [BR:
bhm03009
]
Eukaryotic type
90S particles
RNase
D558_2303 (rnc)
Prokaryotic type
rRNA processing factors
D558_2303 (rnc)
Chromosome and associated proteins [BR:
bhm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
D558_2303 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AIT26964
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All DBs
Position
2169852..2170607
Genome browser
AA seq
251 aa
AA seq
DB search
MSLATLETRLGHHFGDQALLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYAKL
DEGDLSRVRANLVKQASLADIAQRLDLSLYLRLGEGELKSGGFRRPSILADTVEALFGAV
FLDAGFAAARTVIERQYDPVLASVDPQTLGKDAKTLLQEFLQGRKMALPIYTVVATHGAA
HSQQFEVECAIPALEIKVTAGGASRRAAEQSAAKLALEAAQAVSPRVARKGGRARKTAQL
SLPVAVAQEVK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtccttagccacgctggaaacccgcctcggtcatcattttggcgatcaggcattgctt
gagcaggcgctcacgcaccgtagccacggtgcgcgccacaacgagcgcctggagtttctc
ggcgactccgtactgaacttcgtcgtcgccgccatgctgttcgagcgttatgccaagctg
gacgaaggcgatttgtcgcgcgtgcgcgccaacctcgtcaagcaggcgtcgctggccgat
atcgcgcagcgcctcgatttgtcgctttatctgcgtctcggagaaggcgagttgaagagc
ggaggatttcgacgcccgtccatccttgccgacacggtcgaggcattgtttggcgccgtg
tttctcgacgccgggttcgccgcagcgcgtacggtgatcgagcgccagtacgacccggtg
ctcgccagcgtcgatccgcagacccttggcaaggacgccaagacgctgctgcaggagttc
ttgcagggccgtaagatggccttgcccatttacaccgtggtcgctacgcacggggccgcg
cacagtcagcagttcgaggtggagtgcgctattccagctctcgaaatcaaggtgacggcc
ggtggcgcaagccgccgtgccgccgaacaatccgccgccaagctggccctggaggccgcc
caggcggtcagtccgcgagtcgcgcgcaaaggcggccgcgcgcgcaagacggcacaactg
tcgctgccggtggcagtggctcaagaggttaaatga
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integrated database retrieval system