Bordetella holmesii 44057: D558_2316
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Entry
D558_2316 CDS
T03379
Name
(GenBank) periplasmic binding domain protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm02010
ABC transporters
bhm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D558_2316
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D558_2316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhm02000
]
D558_2316
Transporters [BR:
bhm02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
D558_2316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF262
DNA_pol_lambd_f
AIDA
Motif
Other DBs
NCBI-ProteinID:
AIT26977
LinkDB
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Position
2180120..2181337
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AA seq
405 aa
AA seq
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MTMHACAKAAGLCLGALLVGQAMAADKPPVKIGVLTDMSGTYAAMGGAGSVAAAQLAIDD
CLAAECKGMKIELVSADNQNKADVGAARAREWFDRDGVTAIADLTNSAVALAVQGIAREK
NKVVMFSGPATTALTNKECSPVGFHWMFDTYSQSAGGAKATVKAGGKSWYFVTVDYAFGH
SLEADTAKAVKSLGGTVAGSVRHPLNAPDFASYLLQAQSSKAQVVALANGGQDTVNAVKQ
AREFGIVDGGQRLVSLLIFLSDLRALGLENAQGLAYVDGFYWDYDDASRQWSVRFEKAFR
GLKPTMTQAGVYSSVLHYLRAVAAAGSTDGKVVAAKMRELPIKDPIMRNASIRPDGRVIH
DMYLYEVKKPADSKGGWDYSKLVATIPAAEAFQPLADSSCPLVKH
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcatgcgtgcgcaaaggccgctggcctgtgcctgggtgctttgctggtaggg
caagccatggcggcggataagccgccggtcaaaatcggtgtattgacagatatgtcgggg
acctacgcggccatgggtggggccgggtcggtcgcagcggcgcaattggccatcgacgat
tgcttggccgccgaatgcaagggcatgaagattgagctggtctccgctgacaaccagaac
aaggcggatgtgggcgcggcgcgggcccgtgagtggtttgaccgggacggtgtgactgcc
attgccgacctgaccaattcagccgttgcgttggccgtgcagggtatcgcgcgggaaaag
aacaaggtggtgatgttttccggtccggccacaaccgcgctgacgaacaaagaatgctcg
ccggtcggctttcattggatgttcgacacgtactcgcagtctgccggcggtgccaaggcc
acggtcaaggccggtgggaagtcctggtatttcgtgacggtggattatgccttcgggcac
tcattggaggccgatactgccaaagccgtgaagtcgcttggcggcaccgtagctggcagc
gttcgccatccgctcaatgcgccggatttcgcctcgtatctgttgcaggcacaaagctcc
aaggcccaggtggtggctctggccaatggcggccaggatacggtcaacgccgtcaagcag
gcacgcgagttcggcatcgtcgacggcgggcagcggctggtttcgttgctgattttcctg
tcggatctgcgagcgctggggctggagaatgcccaggggcttgcctacgtcgacgggttc
tactgggattacgacgatgcctcccggcagtggtccgtgcgtttcgagaaagccttccgt
ggtctgaagcccaccatgacgcaggccggagtctattcaagcgtattgcattacctgcgt
gccgtggccgctgctggcagcacggatggcaaggtggtggccgccaagatgcgtgaattg
ccgatcaaggaccccattatgcgcaacgcgtccatccgccccgatggacgtgtgattcac
gacatgtacctctatgaggtcaagaagccggccgactccaagggcggctgggattattcc
aaactggtggcgacgattcccgccgccgaagcctttcagccactggccgattcgagctgc
ccattggtcaagcactga
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