Bordetella holmesii 44057: D558_2411
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Entry
D558_2411 CDS
T03379
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
D558_2411
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
Spt6_S1
DUF460
Motif
Other DBs
NCBI-ProteinID:
AIT27072
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Position
complement(2272938..2275325)
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AA seq
795 aa
AA seq
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MSETSALTNAAPGVDHARIIEQIATELSVRASQVARAVDLLDDGATVPFIARYRKEATGG
LDDGALRTLEVRLSYLRELEERRLAILDSIQQQGKLTPELQQEIATADTKQRLEDLYAPY
KPKRRTRAQIAREAGLEPLADAILAEVGCDPAALAAQYLNPEANINDAKAALDGARDILA
ERFAENADLLATMRDHIWSTGLLYSKMVEGKEAEGANFRDWFDFNEALRTLPSHRVLALM
RGRQQGVLELRVGLQQDLEAQAPHPCVARIAGFLKLGSDLFALDARPRERWLGEVCRWTW
RVKLLTAFETEFFGRLREQAEAEAIRVFAANLKDLLLAAPAGPKTVLGLDPGIRTGCKIA
VIDRTGKVVDTSTVYPFEPRMDRKGTIHTLAALCAKHKVELIAIGNGTASRESEKLVADM
MDQFSELSLTRVVVSEAGASVYSASEVAALEFPDLDVTLRGAVSIARRLQDPLAELVKID
PKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVDVNTASAALLARVSGLNNSLAKNIV
SWRDENGAFPTRDMLRKVPRFGDKAFEQAAGFLRIQDGENPLDASAVHPEAYPVVERIVA
RIKADVRQIIGQREALKGVSPTDFTDERFGLPTVRDIFSELEKPGRDPRPEFKTAQFKEG
VETLNDLHPGMTLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQTV
TVKVLEVDVPRKRVALTMRLNDPAEPRRAAAPRTDRQPTANPGQRGVPRRNDGGGPRSSS
LANSAMADAFAKLKR
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacttccgccctcacgaacgccgcgccgggcgtcgatcacgcccgcatcatc
gagcaaatcgccaccgagctgtcggtgcgtgcaagccaggtggcgcgcgccgtcgatctg
ctggacgatggcgccaccgtgcccttcatcgcacgctatcgcaaggaggccactggtggc
ctggatgatggcgcgctgcgtacgcttgaagtccgcctgtcctatctgcgcgagctcgaa
gaacgccgcctcgccatcctggactccatccagcaacagggcaagctgaccccggaattg
caacaggaaatcgccaccgctgacaccaagcagcgactggaggacctgtatgcgccctac
aagcccaaacgccgcacgcgcgcccagatcgctcgcgaagcgggcctggagccgctggcc
gacgccattctggcggaggtgggctgcgatccggccgctctagccgcgcagtacctcaat
ccagaggcgaacatcaacgacgccaaggcagcgctcgacggggcgcgcgacattctcgcc
gagcgctttgccgaaaatgccgacctgctggccactatgcgcgatcacatctggagcacc
ggcttgctctactcaaagatggtcgaaggcaaggaagccgaaggcgccaatttccgcgac
tggttcgatttcaacgaagccctgcgcaccctgccctcgcatcgcgtgctggcgctcatg
cgtgggcgccagcaaggcgtgctcgaactgcgcgtgggccttcagcaagacctcgaggcc
caggcccctcatccctgcgtggcacgcattgcgggcttcttgaaattaggcagcgatctg
tttgcgcttgacgcccggccgcgcgaacgctggctcggcgaggtctgccgctggacctgg
cgcgtaaaactgctcacggctttcgagaccgaattcttcggccgcctgcgcgagcaagcc
gaagccgaagccatccgggtctttgccgccaacctgaaggatctgctgctggccgcgccg
gccgggcccaagacggtgctgggtctggatccgggaatccgcacaggctgcaagattgcg
gtcatcgatcgcaccggtaaggtcgtcgatacctccacggtctatcccttcgagcctcgc
atggatcgcaagggcaccatccatacgctggccgcgctgtgcgccaagcacaaggtcgaa
ctgatcgccatcggcaacggcacggcctcgcgcgagagcgaaaagctcgttgccgacatg
atggatcagttctccgaactgtcgctcacccgcgtcgtcgtatccgaggcaggcgcctcg
gtgtactcggcctcagaagtggccgcgctcgaatttcccgatctggacgtcacgctgcgc
ggcgccgtgtccattgcccgccgcctgcaggaccctctggcagaactggtcaagatcgac
cccaaagccatcggcgtggggcagtaccagcatgatgtcaaccagcgcgagctggctcgc
tcgctcgatgccgtggtcgaagactgcgtcaacgccgtgggcgtggacgtcaacaccgcc
tcggccgccctgctggcgcgcgtctcgggcctgaacaattcgctggccaagaacatcgtg
agctggcgtgacgagaacggcgctttccccacccgggatatgctgcgcaaggttccgcgc
tttggcgacaaggcatttgaacaggccgccggttttctgcgcatccaggacggcgagaac
ccgctggatgcatcggcggtccaccccgaggcctaccccgtggtcgagcgcatcgtcgcc
cgtatcaaggcagatgtgcgccagatcatcggccagcgcgaggcactcaaaggcgtatcg
cccaccgacttcaccgacgagcgcttcggcctgcccacggtacgcgatatcttctccgaa
ctggaaaagcccggccgcgatccgcgtccggaattcaagacggcccagttcaaggaaggt
gtcgaaaccctcaacgacctgcatccgggcatgacgctcgaaggcgtagtcaccaacgtg
gccaatttcggtgccttcgtcgacatcggcgtgcaccaggacgggctggttcacatctcc
gcgctggctgagaagttcgtcaaagatccgcgcgatgtcgtgcgcgtcggccagacggtg
accgtcaaggtcctggaggtcgacgtaccgcgcaaacgtgtggcactgaccatgcgactc
aatgaccccgcagaaccgcgccgcgctgcagcgcctcgtacggatcgccagccgacggcc
aacccggggcagcgaggcgtgcctcgccgcaacgacggtggcggcccacgcagctcgtcg
ctggccaacagcgccatggcagatgccttcgccaagctgaagcgttaa
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