Bordetella holmesii 44057: D558_2809
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Entry
D558_2809 CDS
T03379
Name
(GenBank) bacterial extracellular solute-binding s, 5 Middle family protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D558_2809
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhm02000
]
D558_2809
Transporters [BR:
bhm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D558_2809
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AIT27465
LinkDB
All DBs
Position
2648941..2651187
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AA seq
748 aa
AA seq
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MTLQRISGSLLRGGLALFTMVAVLAGCSRESPINSPYLSGALADNTLYTAFVKRSPKYLD
PASSYSTDETPYTYNIYEPLYGYHYLKRPYELIPRAASEISHPVYLDAQGQPLPDDTPGD
RVAESVYDIKLRPGIRYQPHPSFARKEDGSYAYYPLAAGELDDKFYIPDFAQTGSRELTA
HDYVYAFRRLASPRVVSPIYSLMAEYVVGMQQYGDHLRERDRAQRQGLAAGKHDLPWLDL
RPADGFDGVQALDDHTLRIRVKGKYPQFKYWLAMTFTAPVPWEADRFYSQPGMAEHDLSL
NTWPVGTGPYMLVESRPNWRHVLARNPNFHGEAYPCDGEPGDKEAGLLADCGKPTPFIDK
VVFSVEKEALPLSGKFLQGYYDVPQVERGEYGVSMLVAAGDSQDKAALYRERGIRLPTTV
ETSNWYMGFNWLDPVVGKGDTPQQAERNRKLRQAISIAFDWEEYINIFENGQAAVAYGPV
PPGVLGYQPLPQGYNPKVYDLVDGKPVRKSLDVARRLLAEAGYPDGRNAETGAPLVLYYD
AMSGAGSNPQFDWMRRQLGKIGIQMDIRSTDYNRFQDKMRRGSAQLFLWGWNADYPDAEN
FLFLLYGPNAKAKNGGENAANYENPEFDRLFEQMKFLDDGPEKEAIIARMVEVVRRDAVW
MFGFFPMSGGAYQQWVGNAKPTQMVRNTLQYMKVDPALRVQKTDQWNSPHWWPLGVLVLL
LALAIIPSYITLKRRERQTAFGTRERQS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcaacgcatatcaggcagcttgctgcgcggagggctggccctcttcacgatg
gtggccgttctggcgggctgttcgcgcgaaagcccgatcaacagcccctatctgtccgga
gcgcttgccgacaatacgctgtatacggccttcgtcaagcgatcgccgaagtatctcgat
ccggccagttcctactcgaccgacgagacgccgtacacctataacatctatgagccgctc
tacgggtatcactacctcaagcggccctacgagcttatcccgcgtgcggccagcgagatc
tcgcatccggtctatctggatgctcaaggacagccgttgccggatgacacgccaggcgat
cgtgtcgccgaaagtgtttatgacatcaagctgcgcccgggtatccgttatcagccccat
ccgtctttcgcgcgcaaggaggatggcagctacgcctactatcctctggcggcaggcgag
ctggatgacaagttctacattcccgacttcgcgcagacaggcagccgcgagctgacggcc
catgattacgtctacgcctttcgccggctggccagcccgagagtcgtctcgcccatctac
tcgctgatggcggagtacgtcgtcggtatgcagcagtacggcgaccacctgcgcgaacgc
gatcgcgcgcagcgccagggactggcggccggcaagcatgatcttccctggctggatcta
cgcccggccgacggcttcgatggcgttcaggcgcttgatgatcacacgctgcgcatacgg
gtcaagggcaagtaccctcagttcaagtattggctggccatgacgtttaccgcacctgtg
ccctgggaggcggatcgtttctacagccagcccggcatggccgagcatgacctgtcgctc
aacacctggccggtgggcacgggcccctacatgctggtcgagtcgcgtcccaattggcgt
cacgtgctggcccgcaatcccaattttcatggcgaagcctatccttgcgacggcgagccc
ggagacaaggaagcggggttgctggccgattgcggcaaacccacccccttcatcgacaag
gtggtgttcagcgtcgaaaaagaggccctgccgcttagcggcaagtttctgcagggctat
tacgatgtgccccaggtcgagcgcggcgagtatggggtttccatgttggtggccgcggga
gactctcaggacaaggccgcgctgtaccgcgaacgcggcatccggctgccgaccacggtc
gagacgtccaactggtatatgggctttaactggctggatccggtcgtaggcaagggcgac
acgccccagcaggccgagcgcaatcgcaagctgcgccaggccatcagcattgcctttgac
tgggaggagtacatcaacatctttgaaaacggccaggccgccgtggcgtatggcccggtg
ccgccgggcgtgttgggataccagccgctgccgcagggctataaccccaaggtttacgat
ctggtcgatggcaagccggtgcgcaaatcactggacgtggcgcgccggttgttggcggag
gccggctatccggacggacgcaacgccgagacgggggcgccgctggtgctttactacgat
gccatgagtggcgccggctcaaacccgcaattcgactggatgcggcggcaattgggcaag
atcggcattcagatggatatccgttctaccgactacaaccgtttccaggacaagatgcgg
cgtggcagcgcccagctttttctctggggctggaacgccgactatcccgatgcggagaac
ttcctgtttctgctctacgggcccaatgccaaggccaaaaacggcggagaaaacgcggcc
aactacgaaaacccggagttcgaccgcctgttcgagcaaatgaaattcctcgatgacggg
cctgaaaaagaagccatcattgcccgcatggtcgaggtggtccggcgggatgccgtctgg
atgttcgggttcttccccatgtcgggcggcgcctaccagcaatgggtgggcaacgccaaa
ccgacgcagatggtgcgcaataccttgcagtacatgaaggtcgatccggccttgcgagtc
cagaagaccgaccagtggaattctccgcactggtggccgctaggtgtcctggtactcctt
ctggccctggccattatcccttcctacatcacccttaagcggcgcgagcgccagacggcc
ttcggcacccgggagcgacaatcatga
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