Bordetella holmesii 44057: D558_2888
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Entry
D558_2888 CDS
T03379
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm00470
D-Amino acid metabolism
bhm01100
Metabolic pathways
bhm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D558_2888 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
D558_2888 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bhm01011
]
D558_2888 (alr)
Enzymes [BR:
bhm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
D558_2888 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
bhm01011
]
Precursor biosynthesis
Racemase
D558_2888 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AIT27544
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All DBs
Position
2714256..2715386
Genome browser
AA seq
376 aa
AA seq
DB search
MPRPISALISPSALRHNLSVVRRHLDHRAELEGGVPPSIWAVIKANAYGHGIERVVGAFS
QAQGLAMLDLDEAVRCREAGWGGPIMLLEGFFDVSDLDWLDRYHLSTAIHCQEQLDMLTH
IRPLRRINAMVKLNSGMNRLGFAPQNYGQAYEAARQLQARGVLGSVGKMTHFATADSAQG
PYWQWEVFQAATQGLPGPVSVCNSAGTLRYPQLAVGHAGSDTHWVRPGICLYGASPFDDE
NAAALGLLPAMTLTSEIIGVQQLRAGQTVGYGASFTAPEPMRIGVVACGYADGYPRHCGT
GTPITVAGVATRVLGRVSMDMLAVDLGPVAAAQVGSPVVLWGEGGPSVDEVATSGGTIGY
ELLTALAQRVPVTEIS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtcccatctccgccttgatttcgccctcggctttgcgtcataacctttccgtt
gtgcgccggcatctggatcaccgggccgagctcgaggggggcgtgccgccctccatctgg
gccgtcatcaaggccaacgcgtacgggcacggcatcgagcgcgttgttggcgcgttctcg
caggcgcagggcctggcgatgctggatctggacgaggccgtccgctgccgtgaggccggg
tggggcggcccgatcatgcttctggaggggttttttgacgtcagcgacctggactggctc
gatcgctatcacctgagcacggccatacactgccaggaacaattggacatgttgacgcac
atacgccccctgcgtcgcatcaacgccatggtcaagctcaacagcggaatgaaccgtctc
ggcttcgccccccagaactatggccaggcctatgaggcagcgcgccaattgcaagcgcgc
ggcgtgttgggcagcgtgggcaagatgacgcacttcgccacggcggacagcgcgcaaggt
ccgtattggcaatgggaggtgttccaggcagccacgcaaggactgccggggccggtcagc
gtgtgcaactctgcaggaacattgcgctatcctcagttggcggtcggccacgctggatcc
gatacgcactgggtccggccagggatctgtctgtacggcgcctcgccctttgacgatgaa
aacgcggctgcgctgggcttgttgccggccatgacactgacatccgagatcatcggcgtg
cagcaactgcgggcggggcagaccgttggctacggtgccagctttacggcgccagagcct
atgcgtatcggagtggtggcctgcggctatgcggatggctatccgcggcattgtggtacg
ggaacaccgatcacggtggcaggcgtggcgacccgcgtgctgggccgcgtgtccatggac
atgctggcggtcgatctggggccggttgccgccgcgcaggtgggcagtcccgtggtgctc
tggggcgagggcggcccgagcgtagacgaggtggccacatccggaggcaccataggctac
gaattgctcacggcacttgctcagcgggtacccgtgaccgaaatctcctga
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