Bordetella holmesii 44057: D558_2911
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Entry
D558_2911 CDS
T03379
Name
(GenBank) pseudouridine synthase family protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhm03009
]
D558_2911
Enzymes [BR:
bhm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
D558_2911
Ribosome biogenesis [BR:
bhm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D558_2911
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AIT27564
LinkDB
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Position
2732585..2734327
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AA seq
580 aa
AA seq
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MQDDNSTVDQAPSAEQATAATPEGEGGGRSRGRKLRTPFRRRRADAASEENKDATPVAES
APAEAPRGGDNARQAEREADEALSYLDKAARSEQRLGKYLNSEAIMPKLHKVLADAGVGS
RREMEELIVAGRVSVNGEPAHIGQRVAANDQVRVNGKPISRPNAKKPPRVILYHKPAGEI
VSHDDPGGRANVFARLPKLRTGKWLSVGRLDLNTEGLLIFTTSGDMANRIMHPRYGTERE
YAVRVLGEMDEAQRNSLVEGIDLDDGKAAFGSFEYLGGDGSNRWYRVTLQEGRNREVRRM
FEAVGVTVSRLIRTRFGDLVLPRSLRRGRWEELDASLVSALMVQLGLLREDDESGGRRGK
SRQPQSHDSALPPGFGTMEHNGMNGARIGHRGKLQGGRVGASAPCPSDPFGTGLMFTGGY
ANGHPLGNDAGGKGKPAGAAKGRGRKPAAAAGGSSAAAAAGGAAKPAGSRGAKRPAGGRG
KPGANAAAGAAAAGRPAGGKPVGAKPAGNRSAAGKSAAGPKPAGKGAGRPKSAAPKPAGG
NKSRPRRSGEGRGDDWQPKGAAAHESRLGVMGGRGGRGDR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgacaattccaccgttgatcaggcgccctcggccgagcaggccaccgcggct
acgcctgagggtgagggcggcggccgcagccgcggccgcaagttgcgcacgccgtttcgc
cgtcgccgtgccgatgctgcaagtgaagagaataaagatgcgacccctgtggccgaatcg
gcgccggctgaggcgccgcggggcggtgacaatgcccgccaggccgagcgcgaggcggat
gaggcgttgtcgtatctggacaaggcagcccgcagcgagcaacggctgggcaagtacctc
aacagcgaagccatcatgcctaagctgcacaaggtgctggccgacgctggggtcgggtcg
cggcgcgagatggaggagctcatcgtggcgggccgtgtgtcagtcaacggcgagcccgct
catatcggtcagcgcgtggcggcaaacgatcaggtgcgcgtcaatggcaagccgatttcc
cggcccaatgccaagaagcccccgcgcgtgattctgtatcacaaaccggccggcgagatc
gtcagtcatgacgatccgggcgggcgtgccaacgtatttgcccgtctgcccaagctgcgc
actggaaagtggctctcggtggggcggctggatctgaacaccgaaggtctgctgatcttc
acgacgtccggcgatatggccaatcgcatcatgcatccccgctacggcaccgagcgtgag
tatgccgtgcgcgtactgggcgagatggatgaggcgcagcgcaattccctggtcgaagga
atcgatctggatgatggcaaggctgcgttcggttccttcgagtatctgggcggcgatggc
agcaaccgctggtaccgcgtcacgttgcaggaggggcgcaaccgcgaggttcgtcggatg
ttcgaggctgtgggcgtgaccgtcagtcgcctcatacgcacgcgtttcggcgacctggtg
ttgcctcgctcgttgcgtcgtggccgttgggaagagctggacgcttcgctggtatcggcg
ctgatggtgcaattgggtctgttgcgcgaggatgacgaatcgggcgggcggcgcggcaag
tcgcggcagccgcagtcgcatgacagtgcattgccgccgggctttggcacgatggaacac
aatggcatgaacggcgcgcgcattggtcaccggggtaagttgcagggcggcagggtcggt
gcctcggcgccgtgtccgtcggatccgtttggtacgggcctgatgtttaccggtggctat
gccaatgggcatccgctgggcaatgatgcaggcggcaaaggtaaacctgccggtgcggcc
aaggggcgcggccgcaagccggccgcagcagcgggtggatcgtctgctgccgcggcagca
ggtggggcggccaagccggccggctcgcggggcgcaaagaggcctgctggcgggcgtggc
aaaccgggcgccaatgcggcggccggcgccgcggccgcaggccggccggctggcggcaag
cccgtaggggccaagcctgccggcaatcgttctgcggcgggtaagtctgctgcgggtccc
aagcctgccggtaagggggcaggacgtcccaagagtgcagcgcccaaaccggcgggtggc
aataaatcccgtccgcgccgcagcggcgaggggcgaggcgatgattggcagcccaaaggc
gcggcggcgcacgagtcccgtctgggcgtaatgggtggccggggtggacgcggcgatcgt
tga
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