Bordetella holmesii 44057: D558_2916
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Entry
D558_2916 CDS
T03379
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhm03016
]
D558_2916 (truB)
Enzymes [BR:
bhm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D558_2916 (truB)
Transfer RNA biogenesis [BR:
bhm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D558_2916 (truB)
Prokaryotic type
D558_2916 (truB)
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AIT27569
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All DBs
Position
2740401..2741102
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AA seq
233 aa
AA seq
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MLLLDKPVGLSSNHALQRAKRTLDAAKAGHTGTLDPFATGLLLCCMGRATKISGAMLNAD
KTYCATLQFGEETDSGDLTGNIVARADPGHEVPDEVALREVLSRFQGSIEQIPPMYSALK
RDGKPLYEYARAGIELERPPRRVTIYRIELLSFTGHQAQIDVACSKGTYIRTLAQDIGRA
LGCYAHLAALRRTEVGPFSLDRAVTLDALQAMPDPKAALLALNELPAGLLPAP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgttgttgctggacaaaccggtaggcttgtctagtaatcacgctttgcagcgcgccaaa
cggacgctggacgcggccaaggccggacacaccggcacgctggacccttttgccacaggc
ctgttgctgtgctgcatgggccgcgcgaccaagatatccggcgcgatgctcaacgcagac
aagacttactgcgcgacgttgcagttcggtgaagaaaccgatagtggcgatctgactggc
aacatcgtggcgcgggccgatccgggtcacgaggtgccagatgaggtggcgctgcgcgaa
gtgctgtcacgatttcaaggcagcatcgagcagattccgccaatgtattcggcactcaag
cgcgacggcaaaccgttatacgagtatgcccgcgcgggtatcgagttggaacgcccgcct
cggcgggtcacgatttatcgcatcgaactgctgtcgtttaccgggcaccaggcccagatc
gatgtggcgtgcagtaaagggacttacatccgtacgctggcccaggacatcgggcgcgcg
ttggggtgttatgcccacctggccgccttgcgccgtaccgaggttgggcctttctccctg
gaccgcgcagtaaccctggatgccctgcaagcgatgcccgaccccaaggcggccttgctt
gcgctcaatgaattgccggcgggtttgctgcccgccccctga
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