Bordetella holmesii 44057: D558_3079
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Entry
D558_3079 CDS
T03379
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm03030
DNA replication
bhm03430
Mismatch repair
bhm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D558_3079 (dnaX)
03430 Mismatch repair
D558_3079 (dnaX)
03440 Homologous recombination
D558_3079 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhm03032
]
D558_3079 (dnaX)
03400 DNA repair and recombination proteins [BR:
bhm03400
]
D558_3079 (dnaX)
Enzymes [BR:
bhm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D558_3079 (dnaX)
DNA replication proteins [BR:
bhm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D558_3079 (dnaX)
DNA repair and recombination proteins [BR:
bhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D558_3079 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_2
AAA_18
AAA_5
TsaE
AAA_30
AAA_7
nSTAND3
PIF1
RsgA_GTPase
AAA_19
AAA_28
Rad17
RNA_helicase
ABC_tran
SKI
Motif
Other DBs
NCBI-ProteinID:
AIT27725
LinkDB
All DBs
Position
2882648..2883784
Genome browser
AA seq
378 aa
AA seq
DB search
MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAK
SLNCETGITSKPCGVCRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRF
KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP
ESIVGHLQAVLGQEQIGFEVPALRLIGQAASGSMRDALSLTDQAIAYSAGNLTEDAVRGM
LGTIDQRHLVRLLDALATGDARGVLAVADELATRGLSYAGALADFAVLLSRIAIEQRVSG
VTPADDPSGRISRAWRQACIPMRSSFSIPLPCIAAANSAWRRTSTPGSSWPVCACLPSMA
RRGRRRSAKHHVPHPSQR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacttatctggttctggcccgcaagtggcgtccgcgatccttcgataccctggttggc
caggatcacgtcgtgcgcgcattgacgcatgccctggacacccagcgtttgcaccacgcc
tggctttttaccggtacacgtggcgtgggcaagaccacgctgtcgcgtatcctcgccaaa
tccctcaactgcgaaaccggcattacctccaagccgtgtggcgtgtgccgtgcgtgcacg
gagatcgatgctggccgtttcgtcgactacctcgaacttgacgcggcttccaaccgaggc
gtcgaggagatgacgcaactgctcgagcaggcggtgtatgcaccgggagcggggcgtttc
aaggtctacatgatcgacgaagtccacatgctcaccgggcatgcgttcaacgccatgctc
aagaccctcgaagagccgccgccgcacgtcaagttcatcctggccacgacggatccacag
aaaatcccggtcaccgtactgtcgcgctgcctgcaattcaatctcaagcagatgccgccc
gagtccatcgtgggccatttgcaggcggtgctcggtcaagagcagatcggcttcgaggtg
cccgccctgcgcctgatcgggcaagctgcttcgggttccatgcgcgacgccctgtccctg
acggatcaggcgattgcctacagcgcaggcaatctgaccgaagacgcggtgcgcggcatg
ctgggcaccattgatcagcgccatttggtgcgcctgttggatgccctggccacgggggac
gcccgcggcgtgctggccgtggccgatgagcttgctacccgtggtttgtcctatgctggc
gcgctggcggatttcgccgtgctgctctcgcgcatcgcgatcgagcaacgtgtcagcggc
gtcaccccggccgacgacccctcgggcaggatatcgcgcgcctggcggcaagcctgcatc
ccgatgcggtccagcttttctattccgttgccgtgcatagccgcagcgaactcagcctgg
cgccggacgagtacgccgggttcgtcatggcctgtctgcgcatgcttgccctcaatggcg
aggcggggccggcgacgcagcgcgaagcaccacgtaccgcaccccagccagcgttga
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