Bordetella holmesii 44057: D558_3199
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Entry
D558_3199 CDS
T03379
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhm03016
]
D558_3199 (truA)
Enzymes [BR:
bhm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
D558_3199 (truA)
Transfer RNA biogenesis [BR:
bhm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D558_3199 (truA)
Prokaryotic type
D558_3199 (truA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
HrpB1_HrpK
Motif
Other DBs
NCBI-ProteinID:
AIT27843
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All DBs
Position
2999141..2999956
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AA seq
271 aa
AA seq
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MTRIALGLSYDGSSWQGWQTQPHGQTVQDTLEMALGRFSGIGAALRTVCAGRTDTGVHAA
MQVIHLDTDLNRRAESWVRGVNAFLPSSISVHWALEVPEDFHARFSARSRSYVYLLWRGR
VRPALWAGRAGWCFQPLDVAAMRQAAQTLLGEHDYSSFRSSQCQARHPVRTMSRLDIAEC
GDFLVFTLQANAFLHHMVRNIMGALLQIGQGREPVAWMGHLLAVRDRRLGAPTFSPDGLY
LSAVDYPRAFDLPQLDGAGTFLAPFTSASQP
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcattgcattggggctgtcatatgacggctccagttggcagggttggcaaacc
cagccgcacggccagaccgtgcaagataccctggagatggcattgggccggttctccggc
atcggagccgccttgcgcacagtctgtgcgggccgcaccgataccggtgtacatgctgcc
atgcaggtgattcacctcgataccgacctgaaccggcgagccgagtcttgggttcggggg
gtaaatgcctttctgccttccagcatatccgtgcactgggcgctggaagtacccgaggat
tttcatgcgcggttttctgctcgttcgcgcagctacgtctatctgctgtggcgcggtagg
gttcgtccagcgttatgggcgggccgtgcagggtggtgcttccaacctctggatgttgcc
gccatgcgtcaggccgcgcaaaccctgctgggcgaacacgactactccagttttcgttct
tcacaatgccaagcgagacacccggtgcgcaccatgagccggctggacatcgccgagtgc
ggtgacttcctggtatttacgctgcaggcgaatgctttcttgcatcatatggtacgtaac
atcatgggggcgctgctccagatagggcaggggcgtgagccggtggcgtggatgggccac
ctgctcgcagtgcgtgaccgacgccttggtgcgcccacattttctccagatggcctgtat
ctatctgctgtcgattatccgcgggcattcgatctgccgcagctcgatggcgcaggcacc
tttctagcgccgttcacttctgcctctcaaccttag
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