Bordetella holmesii 44057: D558_3396
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Entry
D558_3396 CDS
T03379
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
bhm
Bordetella holmesii 44057
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
AIT28036
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Position
3172620..3174425
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AA seq
601 aa
AA seq
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MDPQVKRLAVKVEDHPLDYADFFGDIPAGQYGAGHVDIWDRGHWSMQGNPAQALQRGHLH
FRLQGRRLQGDWALIRTRDEQWLLRKVQDVPPKPAARTLPGKAASMPRQLKPPLATLADQ
PPVGEDWRYEVKYDGYRMLCELRDGNVRFISRNGLDWTARMQPLATTIRALKLGQGWLDG
EVVVFNEQGIADFQLLQKALDGDASCLRYVVFDLPYWEGRDLRGIPLSQRQHWLSVLLER
APSPLRLTQRLDIADAAQAAHAWLQACQLQLEGLIALVQWGVIELHTWNSRAPKTETPDR
LILDLDPGDGVDWPTIVEAAQLVRGLMQEVGLVPFLKSTGGKGLHLVAPLKPVAGWQEVK
ALAHGLADRLESVLPDRFVANMAKAKRGGRIFVDYLRNGKAATAVAAFSVRGRPGGPVAM
PLPWDVLDPARDLRTNCFNVRNALEWIETHPHPWADYAASRRQVGPACWLALGCASKRVA
PSRRTAFARAPHATGDPGQSRLAPTPCRPPGRGRRAKAATRNARQRRGGTGHARQPARAG
RPTPLVERGCRGPTVRSSRANGLPRPSTAGRWSSGQAAPARRECAAPNVPPTPATCRPHR
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcaagtcaagcgcctggcagtcaaggtagaggaccacccgcttgattacgcc
gatttcttcggcgatatccctgccggccagtatggcgcgggtcacgtcgacatctgggac
cgcggccattggtccatgcaaggcaatcccgctcaggcactgcagcgcgggcatttgcat
ttccggctgcaagggcgccgtctgcagggtgactgggcgctcattcgcacacgggacgag
caatggctgctgcgcaaagtccaggatgtgccgcccaaaccagccgctcgtacgctgccc
ggcaaggcggcctccatgcctcggcaattgaaaccgcccctggcaacccttgccgatcag
ccgcctgtcggcgaagactggcgctacgaagtgaagtacgacggttaccgcatgctgtgc
gaattgcgtgatggcaacgtccgcttcatcagccgcaatggcctggactggaccgcacgg
atgcagccgctggccacgacgatccgcgccttgaagctgggccaaggttggttggacggc
gaggtggtggtcttcaacgagcagggcattgccgacttccaactgctgcagaaggcgttg
gatggcgatgcttcatgcctgcgctacgtggtctttgacctgccctattgggaaggcagg
gacctgcgcggcataccgttgtcgcagcgccagcattggctgagcgtcctgctcgaacgt
gcccccagcccgctgcggctgacccagcggctggacatcgccgacgcggcgcaagccgca
cacgcctggctgcaggcctgccagctccagctcgaaggccttatcgcgctggtgcaatgg
ggggtgatcgagcttcatacctggaattcgcgcgcgcccaagaccgagaccccggatcgc
ctcatcctggacctggaccctggcgacggcgtcgactggcccaccattgtggaggccgcg
caattggttcgcggcctcatgcaggaggtcgggctggtgccgtttctgaagtccaccggc
ggcaagggcctgcatctggtcgcgccgctcaagcccgtggccggctggcaagaagtcaag
gcgctggcgcatgggctggctgaccggctggaaagtgtgctgccggatcgcttcgtcgcc
aacatggccaaggccaagcgcggcgggcgcatcttcgtggactacctgcgcaatggcaag
gcagcgacggcggtggccgccttctcggtacgcggccgcccaggcggcccggtcgccatg
cccttgccctgggacgtgctggatccggcccgcgatctgcgcaccaactgcttcaatgtg
cgcaacgccctggaatggatcgagacgcacccccatccatgggccgattacgccgccagc
cgccgccaggtcggccccgcatgctggctcgccttgggctgcgcgtctaagcgggtcgcg
ccatcaaggcgcacagcatttgcacgtgcccctcacgccactggcgatcctgggcaatct
cgtctcgccccgacaccatgccggccaccagggcgtggacggcgggcgaaagcagcaacc
aggaatgcgcggcaacgccggggcggcacaggccacgctcggcagcctgctcgagcaggt
cggccaacgcctcttgttgagcgcggctgtcgcggccccaccgttcgatcaagtcgggca
aacgggctccctcggccatcaacagccggaaggtggtcatcagggcaggctgctccagcg
cggcgtgaatgtgctgcaccaaacgttccgccaactcccgcgacgtgccgaccccatcga
gcatga
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