Bordetella holmesii 44057: D558_3409
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Entry
D558_3409 CDS
T03379
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhm03400
]
D558_3409
Enzymes [BR:
bhm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
D558_3409
DNA repair and recombination proteins [BR:
bhm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
D558_3409
Prokaryotic type
D558_3409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIT28049
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All DBs
Position
3188659..3190071
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AA seq
470 aa
AA seq
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MNTLVWLRSDLRLHDNQALSAAATQGLTRAVFLASPGQWQTHGDAAVKVDFWRRNLLVLG
SSLAQLGIELSVLTLKDWSQAPQALAVFCAARAIEQVHINAEWGINERRRDQACTDRLAR
DGVSLSTHHCGTLLPPGTVRTGKGDPYRVFTPYARACRDILRSAPPAAQRAPRPQGPVSS
PPSLPDIWPDVDAGIAARWPAGEDAAHARLRDFLDQDLMRYHERRDLPALPGTSALSPYL
ASGVLSPAQCLRAALRANQGEIDSGQQGARAWITELLWREFYLHLLAAYPALSMHQPMRP
ETRYLAWRRAPEDLRAWQEGRTGIPLVDAAQRQLLATGWMHNRLRMVSAMFLAKNLLLDW
RLGEAWFMGHLIDGDLAANNGGWQWSASTGADAVPYFRVFNPITQSRRFDPKAAFLRHWL
PELAGLDDKSIHEPSDAQRRATGYPQAIADLKTSRLRAIEAFSSLPAAGT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctggtttggctgcgcagcgatctgcgcctgcatgacaatcaggcgctaagc
gcagccgccacccagggcctgacccgcgcggtctttcttgcctcacccggccaatggcaa
acgcatggcgatgccgcggtcaaggtcgatttctggcgccgtaacctgctggtgctgggg
tcgtcgctggcgcaattgggcatagagctgtccgtcctgaccctgaaagattggtcgcag
gcaccgcaggcgctggcggttttctgcgcggcgcgcgccatcgagcaggtgcacatcaat
gccgaatggggtattaacgaacggcgacgcgaccaggcctgcaccgaccggttagcgcgc
gacggggtaagcctgagcacgcaccactgcggaacgctcttgccgcccgggacggtgcgc
acgggcaagggcgatccctaccgggtctttacgccctacgcccgtgcctgccgcgacatt
ctgcgcagcgccccgccggccgcgcagcgggcgcctcggcctcaaggcccggtgtcgtcg
cccccgtcattgccggacatctggcccgacgtcgatgcgggcatcgccgcgcgttggcct
gccggcgaggacgcggcccatgcccggctgcgcgattttctcgatcaggatctgatgcgc
tatcacgagcgccgcgatctgcccgccctgccgggcaccagcgccctgtcgccctacctg
gccagcggcgtgctctcgcccgcccaatgcctgcgcgccgccctgcgcgccaaccagggt
gaaatcgacagcggccaacaaggcgcgcgtgcctggatcaccgagctgctttggcgcgag
ttttatctgcatctgctggcggcttatccggcgttgtccatgcatcaacccatgcgaccg
gaaacccgttatctcgcctggcgccgcgcgcccgaggacctgcgggcctggcaggaaggc
cgcacgggcatcccgctggtggatgcggcacagcgccagttgctggccacgggctggatg
cacaaccggctgcgcatggtcagcgccatgtttctggccaagaaccttctgcttgactgg
cgcctgggcgaagcctggttcatgggccacctcatcgatggcgacctcgccgccaacaac
ggcggctggcaatggagcgcgtcgaccggcgcagacgccgtgccctacttccgcgtgttc
aatcccattacgcagtcgcgcagattcgaccccaaagcggcctttctgcgccactggctg
cccgaactggccggtctggacgacaaatccatccatgagccctctgacgcccagcgtcgc
gccaccggctatccgcaagccatcgccgatcttaaaaccagccgcctgcgcgccatcgag
gccttctccagcctgcccgccgcagggacctga
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