Bordetella holmesii 44057: D558_3799
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Entry
D558_3799 CDS
T03379
Name
(GenBank) bacterial regulatory helix-turn-helix s, AraC family protein
KO
K10778
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:
2.1.1.63
]
Organism
bhm
Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhm03000
]
D558_3799
03400 DNA repair and recombination proteins [BR:
bhm03400
]
D558_3799
Enzymes [BR:
bhm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.63 methylated-DNA---[protein]-cysteine S-methyltransferase
D558_3799
Transcription factors [BR:
bhm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D558_3799
DNA repair and recombination proteins [BR:
bhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
D558_3799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6074
TetR_N
HTH_36
Sigma70_r3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AIT28439
LinkDB
All DBs
Position
3559561..3559911
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AA seq
116 aa
AA seq
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MRVPKLENCSFHHTAAAAEQAGFRPCLLCRPELAPGHSPMDARTSLARRAARLMDDHGGR
HASVRALAQELGCTDRHLRRVFMAEFGVNPIQYLQTSRLLLAKNLLTDTDLGVNCQ
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgccaaaactggaaaactgcagttttcaccataccgccgccgcagccgaacaa
gccggctttcgcccctgcctgttgtgccgcccggaactggcgcccggccactcgcctatg
gacgcccgcacatcgctggcgcggcgcgcggccaggttgatggacgatcatggcggccgc
cacgccagcgtacgtgcgttggcgcaagagctgggctgcaccgaccgccatctgcgccgg
gtctttatggccgagttcggcgtcaacccgatccaatacctgcaaactagccgcctgctg
ctggccaagaaccttctcaccgataccgacctaggtgtgaactgtcaatag
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