Bordetella holmesii 44057: D558_3834
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Entry
D558_3834 CDS
T03379
Name
(GenBank) bacterial extracellular solute-binding s, 5 Middle family protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D558_3834
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhm02000
]
D558_3834
Transporters [BR:
bhm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D558_3834
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIT28474
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All DBs
Position
3588004..3589572
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AA seq
522 aa
AA seq
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MKRVLLTTLAAALVAAAAPVSAENLSIGFADPLSSLDPQLNNHAGDRSVALHFWDLLVEN
KWNKLQPGLALFWKPLDSTTWEFKLRPGVKWQDGTPFTADDLIYSYTRARAVPGSVATYA
GYLRTIESMSAPDPLTFVVKTKTPNPDLPLNLASVHVVSKHVGEKSATEDYNSGKAMVGT
GPYKFVSYTPGDRVVMERNDDYWGGKQPWDKINYRYINNAAARSAALLAGDVDVIDKVSV
SDLDKLKQAPNISVYPYDGLRVMLLQPNFNPAPSPFITDNAGKPLDKNPLLDVRVRQAMN
LAINRPAITDRILQGAATEANQWMPKGTFGYNPDIKNIPYDAARAKKLLAEAGYPDGFKL
TMHVPNDRYPQGAETAQAIAQFWTRIGIKTQVEVVPWAVYSGRANKNEYAVSMLAWGNGT
GEASYALVNILATVSPQKGLGASNWGHYSNPKVDAALDASTSEFDVAKREAILRDSATIV
SDDVGIIPLFHYKNIWAARKGLKVEPMTSDRTAAQMVSKDAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgctcctcaccaccctggccgccgccctcgtggccgcggccgccccggtg
tccgccgagaacctctccatcgggttcgccgacccgttgtcctcgctggacccgcagttg
aacaaccatgccggcgaccgctcggtggccctgcacttctgggacctgctggtcgagaac
aaatggaacaagttgcagcctggcctggcactgttctggaagcccctggacagcaccacg
tgggaattcaagctgcgccctggcgtcaagtggcaggacggcacgccgtttaccgccgat
gacctgatttactcctacacccgtgcccgcgccgtaccgggtagcgttgccacctatgcg
gggtatctgcgcaccatcgaatccatgagcgcaccagatccgctcaccttcgtggtcaag
accaagacgcccaatcccgacctgccgctgaatctggcatcggtgcacgtcgtcagcaaa
cacgtgggtgagaagtccgccaccgaagactacaactcgggcaaggccatggtcggtacg
ggtccgtataagttcgtctcctacacaccgggcgaccgggtcgtcatggagcgcaacgac
gattattggggcggcaagcaaccctgggacaagatcaactatcgctacatcaacaatgcg
gccgcgcgcagcgccgccctgctggccggtgacgttgacgtcatcgacaaagtctcggtc
tcggatctggacaagctgaagcaggcaccgaacatctcggtctatccctacgatggcctg
cgcgtcatgctcttgcagcccaacttcaatcccgctcccagccccttcatcaccgacaac
gccggcaaaccgctggacaagaatccgctgctggatgtgcgcgtgcgccaagccatgaat
ctggccatcaaccgtcccgccattaccgaccgcatcctgcaaggcgcggccaccgaggcc
aatcaatggatgcccaagggtacgtttggctataaccccgatatcaagaacatcccctac
gacgccgcacgtgccaagaagctgctggccgaagccggctacccggacggcttcaaactg
accatgcacgtgcccaacgatcgctacccgcaaggtgccgagacggcgcaagccatcgca
caattctggacgcgcatcggcatcaagacccaggtcgaggtcgtgccatgggctgtttac
tccggccgagccaataagaacgaatatgccgtaagcatgctggcctggggcaatggcacc
ggcgaagccagctacgccctggtcaatatcctggccaccgtgtcaccgcaaaaaggcctg
ggcgcctccaactggggccattacagcaaccccaaggtcgatgcggccctggacgcctcc
acgtccgagtttgacgtggccaagcgtgaagccatcctgcgcgactcggccacgatcgtc
agtgatgacgtgggcatcatccccctctttcactacaagaacatctgggccgcgcgcaaa
ggcctgaaggtcgaaccgatgaccagtgaccgcacggccgcccagatggtcagcaaggac
gccaagtaa
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