Bartonella henselae BM1374163: PRJBM_00005
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Entry
PRJBM_00005 CDS
T03068
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bhn
Bartonella henselae BM1374163
Pathway
bhn03030
DNA replication
bhn03430
Mismatch repair
bhn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PRJBM_00005 (dnaQ)
03430 Mismatch repair
PRJBM_00005 (dnaQ)
03440 Homologous recombination
PRJBM_00005 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhn03032
]
PRJBM_00005 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bhn03400
]
PRJBM_00005 (dnaQ)
Enzymes [BR:
bhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PRJBM_00005 (dnaQ)
DNA replication proteins [BR:
bhn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PRJBM_00005 (dnaQ)
DNA repair and recombination proteins [BR:
bhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PRJBM_00005 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CDO39404
UniProt:
X5ME29
LinkDB
All DBs
Position
2896..3603
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AA seq
235 aa
AA seq
DB search
MREIIFDTETTGLDKEKDRIIEIGCVEMVDRYLTGRRFHVYLNPQGVIIPDEVVAVHGLT
NERLKNEKSFSDIADEFLEFINGATMIAHNASFDIGFLNAELARANKPLISVDNILDTLA
MARRKFPMAPNSLDVLCKRFGIDNSHRVFHGALLDAEILADIYIELIGGKQGVLVFGNNG
SVHEESENDKNAFSAVKIRPQNLSPRLSVQEKTMHADFVKKMGEKALWNSFKIPQ
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattatttttgatacagaaacaacaggtttagataaagaaaaagaccgtata
atcgaaatcggctgtgtagaaatggttgatcgttatcttacaggacgccgattccacgtt
tatttgaacccacaaggcgttattattcctgatgaagttgtagcagttcatggattgacc
aatgaacgtttaaagaatgaaaaaagctttagtgatattgccgatgaatttttagagttt
atcaatggtgcaacaatgattgcccataatgcaagttttgatattggttttcttaatgca
gaattagcacgagcaaataaaccacttatcagtgttgacaatattcttgatacattggct
atggcacggcgcaaatttcctatggcgcctaattctcttgatgttttgtgcaaacgtttt
ggcattgataatagtcatcgtgtttttcatggtgctttgcttgacgcggaaattcttgcc
gatatttatatcgagctcattggtggaaagcagggcgtattggtttttggaaacaatgga
agtgttcatgaagagagcgagaatgacaagaatgctttctcagcagttaaaatccgtcca
caaaacctttctccacggctaagtgtacaagaaaaaactatgcatgctgattttgttaaa
aaaatgggtgaaaaggctttgtggaattcttttaaaattcctcaataa
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