Bartonella henselae BM1374163: PRJBM_00006
Help
Entry
PRJBM_00006 CDS
T03068
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bhn
Bartonella henselae BM1374163
Pathway
bhn03030
DNA replication
bhn03410
Base excision repair
bhn03420
Nucleotide excision repair
bhn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PRJBM_00006 (polA)
03410 Base excision repair
PRJBM_00006 (polA)
03420 Nucleotide excision repair
PRJBM_00006 (polA)
03440 Homologous recombination
PRJBM_00006 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhn03032
]
PRJBM_00006 (polA)
03400 DNA repair and recombination proteins [BR:
bhn03400
]
PRJBM_00006 (polA)
Enzymes [BR:
bhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PRJBM_00006 (polA)
DNA replication proteins [BR:
bhn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PRJBM_00006 (polA)
DNA repair and recombination proteins [BR:
bhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PRJBM_00006 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PRJBM_00006 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DUF4332
HHH_2
DNA_polI_exo1
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
CDO39405
LinkDB
All DBs
Position
3932..6838
Genome browser
AA seq
968 aa
AA seq
DB search
MKATDHLFLVDGSGYVFRAYYALPPLKRKKDGLPVGAVAGYCNMLWKLLCDARNTATGIV
PTHFAVVFDYSSDTFRKQIYPQYKANRVMPPEDLIPQFSLIRQATKAFNLPCIEKEGFEA
DDLIATYAQLATKVGAKTTIISSDKDLMQLVNTHVSLYDGMKDRHIGISEVIEKWGVAPE
KMVDLQALTGDPTDNVPGIPGIGPKIAAQLLNQFGSLDLLLQHVTEVKQTKRRENIQAYS
EQAKISRELVQLKTDVPIENDLDDFILEPQDGPRLIAFLKAMEFATLTRRVAEATACDAA
VIDVLDIDVEWEKSGYERDSNFKRAERESLHDFSENSPQRLAQKRQDQALSQKITRDTYT
TIFDEKTLKEWLSQAQEQGFFAFDTETTSLDPIQAKLVGFSLALQPEKAAYVPLEHVEGE
NDLLKGGRIVSQIETQKALTLLKPILEDQAVLKIGQNIKYDWLVMKQYGIVIHCFDDTML
LSYALEAGTLTHNMNALSERWLGHKPIAYKDLTHNGKKITSFAEVDLKQATLYAAEDADI
TLRLWQVLKPQLVAQGMTRIYERLDRPLIEVLARMEERGILVDRQILLRLSGELAQAAFI
LEEEIYQLSGEKFNLASPKQLGDILFGKMGLPGGAKTKGGQWSTSAQTLEELAAEGHILP
RKIIDWRQLAKLKSTYTDALPSYILPKTGRVHTNYSLAITSTGRLSSSEPNLQNIPVRTA
EGRKIRTAFVAPKRHVLLSADYSQIELRILAHIANITALKEAFSRGQDIHAITASQIFGV
AIEGMPSDIRRRAKAINFGIIYGISAFGLANQLGLSRQEAGRYIQLYFERFPGIKDYIET
TKTFARQNGYVETIFGRRIHYPEIKAASPQVRSFNERAAINAPIQGSAADIIRRAMIQME
DALEKEKLSAKMLLQVHDELVFEVPEEESKKTMAVVKKVMENATMPVLSLSVPLEVKVMV
AQNWDEAH
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacagatcatctttttttggttgatggatcaggttatgtttttcgtgcttac
tatgctttaccgcctttaaagcgcaaaaaggatggactccctgtaggagctgtagctggt
tattgtaacatgctatggaaacttctctgtgacgcccgtaatacagctactggcattgtt
ccaacccattttgctgttgtttttgactattcatcggatacttttcgcaagcaaatttat
ccacaatataaagccaatcgcgtgatgcctcctgaagatcttattcctcaattttctctc
atacgtcaggcaacaaaggcttttaatttgccatgtatcgaaaaggaaggatttgaagcg
gatgatttaattgctacctatgcacaattggcaacaaaggttggagcaaaaacaacgatt
atttcttctgataaagatttgatgcaattggtaaatacacatgtgtctttatatgatggg
atgaaagacagacatatcggtatttctgaagttatagaaaaatggggtgttgcacctgaa
aaaatggttgacttacaagctttaactggagatccaacagataatgtaccaggtattcca
ggtattggtcccaaaattgcagcgcaattgctcaatcaatttggctctcttgatctttta
ttacagcatgtgacagaggttaaacaaacaaaacgacgtgaaaatattcaagcttatagt
gaacaggcaaaaatttctcgtgaattggttcaacttaaaacagatgtacctatagagaat
gatttagatgattttattttagaaccccaagatggaccgcgcttaatcgcttttcttaaa
gctatggaatttgccacattaacgcgtcgtgtagcagaggcaacagcatgtgatgcagca
gttattgatgtacttgatatagatgttgaatgggaaaaatctggatatgaacgtgattct
aattttaaaagagctgagagagaatctcttcatgatttttctgaaaactccccacaacgg
ttagcacaaaaacgtcaagatcaagctttaagccagaaaattacaagagatacctataca
accatttttgatgaaaaaactttgaaagagtggttatcacaagcacaagagcaaggcttt
ttcgcttttgataccgaaacaacctctcttgatcccatacaagcaaaacttgttggtttt
tcgttggcattacaaccggaaaaagcagcctatgtaccccttgaacatgttgaaggggaa
aatgatcttttgaagggcgggcgcattgtttcacaaattgaaacacagaaggctttgacg
cttttaaagccgatattagaagatcaagcggttttaaaaattggtcagaatataaagtat
gattggttagtgatgaaacaatacggcatagtgatacattgttttgatgacacaatgctt
ttatcgtatgctttagaagctggaactttaacacataatatgaatgctttgtctgaacgt
tggcttggtcataaaccgattgcctacaaggatctaacacataacggaaaaaagatcacg
tcttttgcagaggtggatttgaaacaagcaaccctttatgctgcggaggatgctgatata
acgcttcgtttatggcaagttttaaaaccacaacttgtagcgcagggaatgacaagaatt
tatgagcgccttgatcgaccactgatagaggtccttgcaagaatggaagaacgcgggatt
cttgttgatagacagattttattgcgtctttcaggagaattggcgcaggctgcttttatt
ctagaagaagaaatttatcagctgtctggtgagaaatttaatcttgcttcgccaaaacaa
ttaggtgatatcctttttggaaaaatgggattacctggaggtgctaaaacgaagggtgga
caatggtcaacctctgcacaaaccttggaggaattggctgctgaaggccatattttaccg
cgtaaaattattgattggcgtcaacttgcaaaactaaaatctacctatacagatgctttg
ccatcttatattttaccaaagacggggcgtgttcatacgaattattctttagcaataaca
tcaacgggacggttatcgtcatcagaaccaaacttgcaaaacattccagtgcgaaccgct
gaaggacgtaaaatacgaacagcttttgttgctccaaaacggcatgtactgctatcggct
gattatagccaaattgaattacgcattcttgcgcatattgctaacattacagcactcaaa
gaagctttttctagggggcaggatattcacgctattactgcatcgcaaatatttggagta
gcaatagaagggatgccgtcagatataagacgacgcgcgaaggcgattaattttggcatt
atttatggtatttcagcttttggattagccaatcaattaggtctttcacggcaagaagcg
gggcgttatattcagctttattttgagagatttccgggaattaaggattatatagaaacg
acaaaaacctttgcacgccaaaatggttatgtagaaacaatttttggacgtcgtattcat
tatccggaaataaaagcagctagtccacaagttcgttcctttaatgaacgagctgctatc
aatgcaccaattcaaggatcagctgcggatattattcgccgtgctatgattcaaatggaa
gatgctttggaaaaagaaaaactgtcagctaaaatgttattacaagtgcatgatgaattg
gtttttgaggtaccagaagaggagagtaaaaaaaccatggctgttgttaaaaaagttatg
gaaaacgctacaatgccggttttatctttgtctgtgccacttgaagtaaaagtaatggtc
gctcaaaattgggatgaagcacattag
DBGET
integrated database retrieval system
