Bartonella henselae BM1374163: PRJBM_00028
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Entry
PRJBM_00028 CDS
T03068
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bhn
Bartonella henselae BM1374163
Brite
KEGG Orthology (KO) [BR:
bhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhn03400
]
PRJBM_00028 (addA)
Enzymes [BR:
bhn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PRJBM_00028 (addA)
DNA repair and recombination proteins [BR:
bhn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PRJBM_00028 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Integrin_beta
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CDO39427
LinkDB
All DBs
Position
complement(27936..31418)
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AA seq
1160 aa
AA seq
DB search
MTLFSIPEAALDAQATATHPKTNVWVSANAGSGKTHVLSERVIRLLLNGTPPARILCLTY
TKAAAAVMQSRIFRTLSSWNELDDTQLQQTLSQLENKPITAQKLTYARQLFARALETPGG
LKIQTIHAFCESLLHHFMLEANIAGHFELVDDISRKKLLQEARRQLLEHESAQSALKQLL
KVISEHTFNQLLYEATEKQHKLSDFLTSVLSENGEKKLHALFQLAPDDTNEQLLEKIQQT
ARLPLYALTHCQTYGNKSLKEMIAKFSQLEEACDEENIIDIISNIYFKMKGEPRNFSRLS
CKKSDEIWPFIQQTIEDKQSKLSLLLEKYQCSKIATLNKAAFQLCARYLKIYANLKKANG
FLDFNDLIERTLHLLKRQGASQWVHYKLDNGLDHILLDEAQDTNPEQWQIIQLLAQEFFT
GHSQRTNIRTLFAVGDEKQSIYSFQGAAPENFAENGRMIQKKVQQVNQKFEKIQLNYSFR
STPDVLKSVDLVFEKPENYKGLSAENTKTVHEAIRAHSPGEVILWDAISKEKSEFPDAWH
LSVDHLDTPETRLAEKIAETIANWLHNGEMLPAKGRLMRASDIMVLVRKRDHFVSALSRA
LKLRNIPIAGADRLQLTKHMSVRDLMALARFVLQPKDDLSLACVLKSPLFSLSEEELYQL
AAHRTGSLWQSLCMHASHVSSHASFRDAFENLNHYRTLVDKIPVFEFYSYILNNDKGRQK
ILARLGSEANDVLDAFMDYTLTLQKTGLPGLQAFLETLSANDPEIKREFDQNHEEVRIMT
VHAAKGLEASVVFLVDPGSAIWHSQHAPHLLKTPSSHPQWSDQQAFIWRPNEKFDTKLSQ
QALSYLKERAEEEYRRLLYVGMTRAEDRLFVCGYSGEKTSPHTWLQLVKNALKPHAFVID
GPAEDIAAWRYCITASSYAPIKQEVPCAEYQTLPSLPTFFSHKVPEEPALPKPLRPSVAS
LSIEADTEISSNLKYLSLSPVLGETNINRAFSIEYGNIVHRLLQHLPNCPAQKRRDYAQY
YLNTKASHWQETQKEKALCHVWQILDHSSLKPLFSDHSRAEVSLMGIVKIRGKEQAISGQ
IDRLYITENSIIFADFKTGAPPEDEAAIAPHYLLQMALYRKLLQAIHPDKDIQALLVYSK
EVKVFKLPPKKLDALLDEIA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgactcttttttctattcctgaagcagcccttgatgcacaagcaacggcaacacatcca
aaaacaaatgtatgggtttctgcaaatgcaggatctggaaaaacccatgttttaagcgaa
cgtgttattcgtttgcttttaaatggtacccctccagcacgtattttatgccttacttat
acaaaagccgctgccgccgttatgcaatcgcgaatttttcgcacactttccagttggaat
gaactagacgatacacagctgcaacaaactttatcgcaacttgaaaataaacccatcact
gcgcaaaaactcacctatgcgcgtcaactctttgctcgtgccttagagactccagggggc
ttaaaaattcaaacgattcatgcattttgtgaatctctcttgcatcactttatgctagaa
gccaatattgctggacatttcgaactggtcgacgatatcagtcgaaaaaaactactccaa
gaagcacgccgccagcttttggagcatgaaagtgcacagtctgctttaaaacagttgctt
aaagttatcagtgagcacacttttaaccaattactgtatgaagcaactgaaaaacaacat
aaactgtctgattttttgacttctgttctttctgaaaacggagaaaaaaaactgcatgcg
ctctttcagttagcgcctgatgacacaaatgaacagttgttagaaaaaattcaacagact
gctcgcctgcctctttatgctcttacccattgtcaaacctatggtaataagagcctcaaa
gaaatgattgcgaaattttctcaattagaagaggcctgtgatgaggaaaacatcatcgat
attatttccaatatttattttaaaatgaaaggcgaaccacgtaatttttcacgcctatct
tgtaaaaaatcagatgaaatttggccctttattcaacaaacgattgaagacaaacaaagc
aagctttctcttcttttagaaaaatatcaatgctcaaaaattgccacacttaataaagct
gcttttcagctttgtgccagatatcttaaaatctacgcaaatctcaaaaaagccaatggg
tttttagattttaacgacctcattgaacgcacactccatttgttaaagcgtcaaggtgca
agccaatgggtgcactataaacttgataatggtcttgatcatattttgcttgatgaagcg
caagatacaaaccctgagcaatggcaaattattcaacttttggcacaagaattttttaca
ggtcatagtcaacgcacaaatatacgcactctttttgctgttggagatgaaaaacaatcc
atctattcttttcaaggcgctgctccggaaaactttgccgaaaacggacgaatgattcaa
aaaaaagtacagcaggtgaatcagaaatttgaaaaaatacaacttaattattcttttcgt
tctacaccggatgtccttaaaagcgttgatctcgtctttgaaaaacccgaaaattataaa
gggctttcagcagaaaatacaaagacagtgcacgaagctattcgtgctcatagcccagga
gaggttattttatgggatgccatttccaaagaaaaaagtgaatttcctgatgcgtggcat
ttaagcgttgatcatttagacacacctgaaacacgtttggcagaaaaaattgctgaaacc
attgccaactggttacacaacggagaaatgcttccagcaaaaggacgcctcatgcgtgcc
agtgacattatggtcttggtgcgtaaacgtgatcactttgtttctgccctttctcgtgcc
cttaaattacgcaatattcccatcgctggtgctgatcgtttacaactcaccaaacatatg
agtgtgcgtgatttaatggcgctggcacggtttgttttgcaaccaaaagatgatctttct
cttgcttgtgttttaaaaagtccacttttttcgcttagcgaagaggaactttatcaactt
gcagcgcaccgtacaggctctctttggcaaagtctctgtatgcatgcctcgcatgtctca
tcacacgcatcttttagagatgctttcgaaaatttgaatcattatcgcactcttgtggat
aaaataccggttttcgaattctatagctatattttaaacaatgataaaggacgacaaaaa
atccttgctcgcttaggatctgaagcaaatgatgtgcttgatgcttttatggattataca
ctcactcttcaaaaaacgggtttaccaggattgcaagcttttttggaaacattaagcgca
aacgatccagaaattaaacgagaatttgatcaaaaccatgaagaagttcgtatcatgact
gtacatgccgcaaaagggctagaggcttctgttgtgtttctggttgatccaggaagtgct
atttggcactctcaacatgcacctcatttgcttaaaactccttcaagtcatccacaatgg
agtgaccaacaagcgtttatttggcgccccaatgaaaaatttgatacaaaactctctcaa
caagcactgtcatacttaaaagaacgcgcagaagaagaatatagacgccttctctatgta
ggaatgacacgcgctgaagatcgattgtttgtttgcggatatagcggtgagaaaacctcc
cctcatacgtggctacaattggtaaagaacgctctcaaaccgcatgcgtttgttatagat
ggtccagcagaagatattgcagcttggcgttattgtattacagcttcttcttatgcccct
ataaagcaagaagtaccttgtgctgagtaccaaacactcccatctttgcccacttttttc
tcccataaagtccccgaagaaccagctctacccaaaccgttgaggccctctgttgctagc
ctttctattgaagctgatactgaaatttcttctaatctaaaatatcttagcctctcacct
gtcttaggagaaacaaatatcaatagagctttttccattgaatatggtaatattgttcac
cgattgctgcaacatttacccaattgtcccgctcaaaaacgtcgcgattatgcccaatac
tatctcaatactaaagcttctcattggcaggaaacacaaaaagaaaaagctctttgtcat
gtttggcaaattttagatcattcctctctcaaacccctcttctctgatcattcgcgtgct
gaagtctccttaatgggtattgtaaaaattcgtggaaaagagcaagcaatttccggacaa
attgaccgtctctacatcacagaaaacagcatcatctttgcggattttaaaacgggagcc
ccaccagaagacgaagccgctattgcaccacactacttgttgcaaatggctctttaccga
aaattgctgcaagctattcatcccgataaagatattcaagctcttcttgtctacagtaaa
gaagtgaaagtttttaaacttcctccgaaaaaacttgatgcgcttcttgatgaaattgct
tga
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