Bartonella henselae BM1374163: PRJBM_00221
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Entry
PRJBM_00221 CDS
T03068
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bhn
Bartonella henselae BM1374163
Pathway
bhn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRJBM_00221 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhn03019
]
PRJBM_00221 (pnp)
03016 Transfer RNA biogenesis [BR:
bhn03016
]
PRJBM_00221 (pnp)
Enzymes [BR:
bhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PRJBM_00221 (pnp)
Messenger RNA biogenesis [BR:
bhn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PRJBM_00221 (pnp)
Transfer RNA biogenesis [BR:
bhn03016
]
Prokaryotic type
tRNA degradation factors
PRJBM_00221 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
DUF2533
DOT1
DUF1108
Motif
Other DBs
NCBI-ProteinID:
CDO39616
LinkDB
All DBs
Position
complement(282284..284485)
Genome browser
AA seq
733 aa
AA seq
DB search
MFKTHKIEIEWAGRPLTLETGKIARQADGAVIATYGETIVLATVVSAKSPKPDQDFFPLT
VNYQEKSYAVGRIPGGYLKRESRPSENETLISRLIDRPIRPLFADGYKNDTQVIVSVIQH
DLENNPDILAMIASSAALTLSGVPFMGPIAGARVGYCNGQYILNPHIDEMSESKLDLVVA
GTENAVLMVESEAQELPEDIMLGAVMFGHKGLQPILDAIIKLAEVAAKDPRDFVPEDLSD
LETAMLEMAEKDIRKAYTITDKQERYAALDALKTEIINKFMPETEEDCKFSVDQIATVFK
QLQAKIVRSNILDTKKRIDGRDLSTVRPIQSEVGILPRTHGSALFTRGETQAIVVATLGT
GEDEQYIDSLTGMYKETFLLHYNFPPFSVGETGRLGSPGRREIGHGKLAWRAIHPMLPSK
ESFPYTIRAVSEITESNGSSSMATVCGTSLALMDAGVPLARPVAGIAMGLIKEGERFAVL
SDILGDEDHLGDMDFKVAGTANGITALQMDIKIDGITEEIMKIALEQAKGGRIHILNEMA
KALTSARAELSEFSPRIEVMNIAVDKIRDVIGTGGKVIREIVEQTGAKINIEDDGTIRIA
SADAKTIEAAKRWIHSIVDEPEVGVIYQGTVVKTAEFGAFVNFFGSRDGLVHISQLTTER
VTKTTDVVKEGDKVWVKLMGFDERGKVRLSMKIVDQKTGKEIIGEDSIKAEQEKYTEETH
KSENKRRRKKKEE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaacacacaagatagaaattgaatgggcaggcaggccactaacccttgagaca
gggaaaatagcgcgtcaagctgatggcgcagtcattgctacctacggtgaaactattgtc
ttagcaaccgtggtatcagcaaaaagccccaaaccagaccaagacttttttccactcacc
gttaattatcaagaaaaatcctatgctgttggtagaatccccggtggttatttaaaacgt
gaaagccgaccaagtgaaaatgaaactttaatttcacgtttaattgatcgtccgattcgc
cccctcttcgctgacggttataaaaatgatacacaagtcattgtatctgttatacagcat
gatcttgaaaataacccagatattctcgcaatgattgcatcttctgctgcattaactctg
tcaggtgttcctttcatgggccccattgccggagctcgtgttggctattgtaacggacaa
tatattctcaatccccatatcgatgaaatgtccgaatcaaaactcgatctcgttgttgcc
ggaacagaaaatgctgtattgatggttgaatcagaagctcaagaattgcctgaagacatc
atgttgggtgccgttatgtttggacacaaaggtcttcaacctattcttgatgctattatc
aaacttgccgaagttgctgcaaaagatccacgcgattttgttcccgaagatctctctgat
ctcgaaacagctatgctggaaatggccgaaaaggatatacgaaaagcctatacaattacc
gataaacaggaacgttacgctgcacttgatgcacttaaaacagaaatcatcaataaattt
atgccagaaacagaagaagactgtaaatttagtgtagatcaaattgcaaccgttttcaaa
cagttgcaagcaaaaattgttcgctcaaatattcttgatacgaaaaagcgtattgatgga
cgcgacctttcaacagtacgtcccatccaatcggaggttggtattttaccccgaacacac
ggatcggcactctttacccgtggagaaacacaagcaattgtcgttgcaacactaggaacc
ggtgaagatgaacaatatatcgattctttaacgggtatgtataaggaaacattcctcctt
cattataattttccaccattttcagtgggtgaaacaggacgtcttggctctcctggtcgc
cgcgaaatcgggcatggtaaactggcgtggcgtgccattcatcctatgttgccaagtaag
gaatcctttccttacaccattcgtgctgtttcagaaatcactgaatccaatggatcttct
tccatggcaacagtttgcggaacttcccttgctctcatggatgccggtgttcctctggca
cgtcccgttgcaggtattgccatgggcttgattaaagaaggtgaacgttttgctgtgctc
tctgatatcttaggagatgaagatcatcttggagacatggattttaaagtagccggaaca
gcaaatggtattaccgccttgcaaatggatatcaaaattgatggtattaccgaagagatt
atgaaaatcgcgcttgaacaagccaaaggtggtcgaatccatatccttaatgaaatggcc
aaagctttaaccagtgcacgtgctgaactcagtgaattttctccacgcatcgaagttatg
aacattgctgttgataaaattcgcgatgttatcggtactggcggtaaagttattcgagaa
atcgttgaacaaactggagcaaaaatcaatatcgaagatgatggaaccattagaattgct
tctgccgatgccaaaactattgaagcagcaaaacgctggattcattcgattgttgatgaa
cctgaagttggcgttatttatcaaggaacagttgtaaaaactgcagaattcggtgcattt
gtaaacttttttggctcacgtgatgggcttgtgcatatctctcaacttacaacagaacgt
gtcacaaaaacaacagatgttgttaaagaaggcgataaagtttgggttaaattaatgggt
tttgatgagcgtggtaaagttcgcttatcaatgaaaatcgtcgaccaaaagaccggtaaa
gaaattattggtgaggattcgataaaagcagaacaagaaaaatacacagaggaaacacat
aaatctgaaaacaagcgccgtcgtaagaaaaaagaagagtaa
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