Bartonella henselae BM1374163: PRJBM_01071
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Entry
PRJBM_01071 CDS
T03068
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bhn
Bartonella henselae BM1374163
Pathway
bhn03420
Nucleotide excision repair
bhn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PRJBM_01071 (uvrD)
03430 Mismatch repair
PRJBM_01071 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhn03400
]
PRJBM_01071 (uvrD)
Enzymes [BR:
bhn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PRJBM_01071 (uvrD)
DNA repair and recombination proteins [BR:
bhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PRJBM_01071 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PRJBM_01071 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
NUP120_helical_2
PcrA_UvrD_tudor
AAA_11
DUF4420
Tudor_1_RapA
DUF3553
Motif
Other DBs
NCBI-ProteinID:
CDO40440
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All DBs
Position
1202903..1205239
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AA seq
778 aa
AA seq
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MNNFSNHIPFFEDDSPPHKHENNSGLTNQNVTVKEKTQYSADYLEKLNPEQQQAVMNTEG
PLLVLAGAGTGKTRVLTTRISHILHSGLASPQQILAVTFTNKAAREMKMRIGELIGEIVE
GMPWLGTFHSIGAKILRRHAELVNLKSNFTILDSDDVTRLLKQLIQAEGLDDKRWPARNL
AIMIDSWKNQGLSPEHISESDAHSFGNGMGRELYHNYQHRLKSLNACDFGDLLLHSISIF
QHNPDILRDYHSKFRYILVDEYQDTNTAQYLWLRLLAQQPKGQHINLCCVGDDDQSIYGW
RGAQVDNILRFEKDFPPAKIIRLERNYRSTSHILKTASHLISHNQGRLGKTLFSDQVNTE
EEKVKIHAAWDSEEEARAIGEEIERAQQADHSLNHIAILVRASFQMREFEDRFVTLGLNY
RVIGGPRFYERMEIRDAMAYLRVVVQPADDLAFERIINTPKRGLGDATLRILYESARTRA
IPLFFAAAEIIETDELKPKARSALRSVVENFRRWQNMLQNTPHRELAEIILDDSGYTSMW
LEDRSPEAPTRLENLKEMVRSMEQFESLPSFLEHVALVMDAENDENTDAVNIMTLHSAKG
LEFETVFLPGWEEGLFPHQRSLDEGGRSGLEEERRLAYVGLTRAKKHLHIWFVSNRRIHG
FWQSTLPSRFLNELPEEHIEVVEMETSYGGYGKSRFKHHNPFYHEYSTSKQKRVQKNIEG
KVIARSISETPSDFSINDRIFHIKFGYGHISAIDGHKLTIVFEKAGEKRVLDNFVSKA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctaatcacataccattctttgaagatgactcccctccccataagcat
gaaaataactctgggttaaccaaccagaatgtaacagtaaaagaaaaaacacaatatagt
gctgattatttagaaaaactcaatcccgaacaacaacaggccgttatgaatacagaaggc
cctcttttagttcttgcaggtgctggtactggaaaaacgcgcgttctgacaacgcgtatt
tctcatattttgcactctgggcttgcttcacctcaacaaatactcgctgtaactttcacc
aacaaagcagcacgtgaaatgaaaatgcgtattggtgaacttattggtgaaattgttgaa
ggcatgccttggcttggaacttttcattctatcggtgcgaagattttacgccgccatgca
gaacttgtgaacttaaaaagtaactttacaattcttgatagtgatgatgttactcggctt
ttaaaacagcttattcaagctgaagggttggacgataagcgttggcccgcacgaaacctt
gccattatgattgattcttggaaaaatcaaggactttcaccagaacatatttcagaaagt
gatgcccattcctttggtaacggcatgggacgtgaactttaccacaattatcagcatcga
ttaaaaagcctcaatgcttgtgattttggtgatcttcttcttcattctatctctatcttc
caacataacccagacattcttcgcgattatcattctaaattccgctatattcttgtagat
gaatatcaagatacgaatacagcacaatatctttggctccgccttttggcacaacaaccc
aaggggcaacatattaacctttgttgtgttggtgatgatgaccaatccatttatggatgg
cgtggtgctcaagttgataacatattgcgttttgaaaaagattttcctcctgcaaaaatt
attcgtttagaacgcaattatcgctcaacatcccatattctcaaaaccgcttctcatctg
atttctcataatcaaggaaggcttggaaaaactcttttttctgatcaagtaaataccgaa
gaagaaaaagtaaaaattcatgctgcctgggattcggaggaagaagctcgcgccatcgga
gaagaaattgaacgcgcacaacaagccgatcattcattaaatcatatagctatattggtg
cgcgcatcattccaaatgcgtgaatttgaagatcgctttgtaacacttggtctcaattac
cgtgtcattggtggtccacgcttttatgaacgaatggaaatacgtgatgcaatggcatat
ttgcgcgttgtggttcaaccagcagatgacttagcttttgaacgtattattaacacacca
aaacgcggtttaggagatgctactctgcgcattctttatgagagcgcaagaacacgcgct
attcctctcttttttgccgccgccgaaatcattgaaacagatgagttaaaacccaaagca
cgcagcgctttgcgaagcgttgttgaaaacttccgtcgctggcaaaatatgctccaaaac
acaccccatagagagcttgccgaaataattctggatgattcaggctacacaagtatgtgg
ctagaagatcgctcaccggaagcaccaacacgactagaaaatctcaaagaaatggttcgc
tctatggaacaattcgaaagcctccctagctttttagaacatgttgcactggttatggat
gctgaaaacgatgaaaataccgatgcagtcaacattatgacacttcattcagcaaaaggg
cttgaatttgaaaccgtctttcttcctggttgggaagaagggctctttcctcatcagcgt
tcattagatgaaggtggacgttcaggattagaagaagaacgacgattagcttatgtagga
ctaacaagagcaaaaaaacatttgcatatatggtttgtatccaatcgaagaattcatgga
ttttggcaatctacccttccttctcgttttcttaatgaattaccagaagaacatatagaa
gtcgtagaaatggaaacatcttatggtggttatgggaagtcgcgctttaaacatcataat
cctttttatcatgagtattcgacatcaaaacaaaagcgcgtacaaaaaaacattgaagga
aaagtcatcgctcgatcaatctctgaaactccatcagatttttccatcaatgatcgaatt
tttcacataaagttcggttatggtcatatctcagcaatagatggtcataaattaaccatt
gtatttgagaaagcaggagaaaaacgagtgctcgataattttgtaagcaaagcttag
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