Bordetella holmesii ATCC 51541: D560_0006
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Entry
D560_0006 CDS
T03052
Name
(GenBank) integrase core domain protein
KO
K07497
putative transposase
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
D560_0006
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GFIT
Motif
Pfam:
rve
HTH_21
rve_2
rve_3
HTH_Tnp_1
DDE_Tnp_IS240
Peptidase_C10
Motif
Other DBs
NCBI-ProteinID:
AHV91859
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Position
5445..6320
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AA seq
291 aa
AA seq
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MKYAFIKAHEEQYAVRRLCAVLGVHPSGYYAWKVQPVSARGAQDKRVGALIEQCWEDSGR
IYGYRKISSDLNDMGERCGKHRVARLMRQAGLRSHTGYGRRPGGRGTRPSVVAPNHLQRQ
FRVDAPNQVWVTDITYIRTHEGWLYLAAVLDLFSRQIVGWSMSDRMTRELAINALLAAVW
RRKPEAEVLVHSDQGSQFSSHDWQDFLKAHRLRPSMSRRGNCYDNAVAESFFQLLKRERI
RRKIYSTRDQARADVFDYIELFYNPRRRHSYIGQVSPVEFERRYFLMNGTV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtacgcgtttatcaaggcccatgaggagcaatacgctgtgcgtcgcctatgcgca
gttttgggggtacatcccagcggctattacgcttggaaggtgcagcctgtgagtgcgcgc
ggggcacaggataagcgcgtcggcgcgctcatcgagcagtgctgggaagacagtggccgg
atctacggttatcgtaagatcagcagtgacttgaacgatatgggagagcggtgtggcaag
caccgcgtggcccgcttgatgcgccaagctggcttgcgatcacacacaggatacggccgt
cgtccgggaggccgaggtactcgtcccagcgttgttgctccgaaccatctacaacgccag
ttccgggtcgatgcccccaaccaggtctgggtgaccgacattacctacatccgaacacac
gaaggttggctctatcttgccgcggtattggatctgttctcgcggcagatcgtgggctgg
tccatgagcgatcggatgacccgagaacttgccatcaacgcattgctggctgcggtctgg
cgtcgtaaaccagaggccgaagtactcgtgcattcagaccaagggagtcagttcagcagt
catgactggcaagacttcctgaaagcccatcggttgcgccccagcatgagcagacgagga
aactgctatgacaacgccgttgctgagagcttctttcagttgctcaagcgtgaaagaatc
cgacgcaagatctattccactcgcgaccaggcacgcgccgatgtgtttgactatatcgag
ttgttctacaacccacgacggcgccacagctatatcggccaggtttctccggtagagttc
gaacggcgctactttttgatgaacgggactgtctaa
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