Bordetella holmesii ATCC 51541: D560_0039
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Entry
D560_0039 CDS
T03052
Symbol
dctD
Name
(GenBank) C4-dicarboxylate transport transcriptional regulatory protein dctD
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D560_0039 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
bho02022
]
D560_0039 (dctD)
Two-component system [BR:
bho02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
D560_0039 (dctD)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
AAA_7
IIGP
Motif
Other DBs
NCBI-ProteinID:
AHV91572
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All DBs
Position
34537..35871
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AA seq
444 aa
AA seq
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MVDDDPDALRACLQTLQMRGFSVRGFSSALLALPHINRDFGGVVVTDVRMPGMDGISFLL
RLRDIDADIPVILVTGHGDIAMAVQAMRDGAYDFLAKPYPADLLLAAIDRAAEKCRLVLS
NRQLREAAAHAMDEDIPFIGVTPAMQRIKQTLRQIADADVDVLIEGETGTGKEVVATMLH
RLSHRRDHPLVAINCGALPETVIESELFGHEPGAFTGAQKKRIGRIEYASGGTLFLDEIE
SMPLALQVKLLRVLEGRQVAPLGTNEVRSVDLRVVAATKTDLSAEAMRASFREDLFYRLN
VVTLHLPPLRERRADIALLFAHFTAQAARRFHREAPAITEDVRHHLATHRWPGNIRELAH
FAERFVLGGLNPPVSQSHPEPGLSLPQRMEQFEAQIIRQTLASHRGEVKATMAALGLPRK
TFYDKLQRHGIDRQDYASADSGTQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgatgatgacccggatgcattgcgcgcctgtctccagacgcttcaaatgcggggg
ttctccgtccggggcttcagttcggcattgcttgccttgccgcacatcaatcgcgatttt
ggcggagtcgtcgtcacggatgtccgcatgccgggcatggatggcatttcctttttgctg
cgcttgcgcgacatcgatgcggacatccccgtcattctggtgaccggccacggtgacatc
gccatggcggtgcaggccatgcgcgacggcgcctatgattttctggccaagccctacccc
gcggatctgcttctggccgccatagaccgtgcggccgaaaaatgccgcctggtattgagc
aaccgccagttgcgggaagcggctgcccacgccatggacgaagatatcccgttcatcggc
gtgacgcctgccatgcagcgcatcaaacagacgttgcgtcagatcgccgacgcggatgtg
gacgtgctcatcgaaggcgaaaccggcacgggcaaagaagtagtggccaccatgctgcac
aggttgtcgcatagacgcgaccaccctctggtggcgatcaactgcggcgcgctgcccgaa
accgtcatcgaatcagagctcttcggccatgagccgggcgcttttaccggtgcccagaaa
aaacgcatcgggcgcatcgagtacgccagcggcggcacgctgtttctcgatgaaatcgaa
agcatgccgctggccttacaggtcaaacttttacgcgtactggaaggccgtcaggtcgcc
ccgctgggcaccaatgaagtgcgctcggtcgatctgcgcgtggttgcggcaacaaagaca
gacctcagcgccgaggccatgcgggcgagtttccgcgaggaccttttctaccgtcttaac
gtggtcacgctgcatctgccgccattacgtgagcgccgtgcggatattgcactgctattt
gctcactttaccgctcaggccgccaggcggtttcatcgcgaggcgcccgctatcaccgag
gatgtccgccatcatctggccactcatcgctggcccggcaacatccgcgagctggcacac
tttgccgaacgctttgtgctgggggggctcaacccgcccgtgagccaatcgcacccagag
ccggggttgagtctgccccagcgcatggagcaatttgaagcgcagatcatccgccagaca
ctggcctcgcatcggggcgaggtcaaagcgacaatggccgccctgggcttgccgcgcaag
accttctacgacaagctgcaacgccatggcatagaccggcaggactatgccagcgcggac
tcaggcacgcagtag
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