Bordetella holmesii ATCC 51541: D560_0356
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Entry
D560_0356 CDS
T03052
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bho02000
]
D560_0356
Transporters [BR:
bho02000
]
Other transporters
Pores ion channels [TC:
1
]
D560_0356
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AHV94936
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Position
326947..329325
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AA seq
792 aa
AA seq
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MPWLLALLLALMLTCLSAFWLPAAHAQLAPEPAAQSATTTPEALTPAALADLLDNPATRE
ALVKTLRQQSAGQAPATATQKAPLAAAEPGLQERMTDNLQRFLTGLAADTGQGVEDLRKL
AYGQSLRMDGQTATHVFLPLGLTALATIIAFILLRLIALRIYTRIDHWVADCAPETTARP
LPLRVLYQRAGAILGAVAIDAGIVLLAAAAGGAAGLWGTPATGKLDALAILFLRAFVSVE
LVKVVIRTIFAVRHPHLRLLPMADEHARYWNAWLIRVVAIAGYGTLLVAPVIAIALSPAL
GHLASLIIMLAVYIYAVRVIWHNRQAVRSHLEHRAAHAATFMGTRLRFLSRIWHILGIGY
FTILLVLSQIDPTNALPFMARATLQTLLSIGAGSLIILMLNTVLAKRIHLPDDLRRRLPL
LETRVNAYVPATLKFIGWIVRIVILLLILDAWHAFDLSSWLASDRGAAAIRMVINIAIVL
LIATLAWTVIASVIEHRLSQSEGCGMPSARERTLLALFRNAALIVIVTMTLMVLLSQIGI
DVGPLIAGAGVVGLAIGFGAQKLVQDIITGVFIQLENGMNENDVVEVAGVFGTVEKMTIR
SVGIRTLDGGYHLVPFSSVDVVANHMRDFSYHLGEYTIAHRESVDDAIEHMRAAFAELLT
DSVLGPEIIEDMTVAGVTAVNDKGVTIRILIKTTPGMQWAVQRGYNRLLKKHFDAANIEL
PYPHTVVYFGQDKRGYAPATNVVMQPERLDQGENAAAPGQTRRALEPTDRADDTSEVLGN
ELELRDEPPRQG
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
gtgccctggttgctggcgttgctgttggcgttgatgcttacttgcttatcggccttctgg
ttgcctgccgcacatgcgcagcttgcccctgaaccggccgcacagtccgcgacaacgaca
ccagaggcgttgactccggccgcactggccgacctgctggacaatcccgccacccgcgag
gcgctcgtaaagaccttgcggcagcagtcggcaggacaagcgcctgccaccgccacgcag
aaagctcccctggccgctgcggagccggggctgcaagagcgcatgaccgacaacctgcag
cgcttcctgacaggcctggccgccgatacaggtcagggggtggaagatttgcgcaagctc
gcctacgggcagagcctgcgcatggacggacaaaccgccactcacgtgttcctgccgcta
ggcctgactgcacttgccacgattatcgctttcattctgttgcgcctgattgcgctgcga
atctatacgcgcatcgatcactgggtggccgactgcgcccccgagaccactgctcgcccc
ctgcccctgcgggtgttgtaccagcgcgcaggagccatcctgggtgcggtggccatcgat
gccggcatcgtgctgcttgccgctgcagcaggcggcgcagcagggctgtggggcacgccc
gccacgggaaaactggacgcgctggcgattttgtttctgcgcgcgttcgtctccgtcgag
cttgtcaaagtcgtaatacgcacgatcttcgccgtacgccatccccaccttcgcctgctg
ccaatggccgacgaacatgccaggtactggaacgcgtggctcatacgcgtggtggcgatc
gccggctacggcacgttgctggtcgcgccggtcatcgcaatcgccctttcgccagcgctc
ggccacctggccagcctgatcatcatgcttgcggtctatatctacgcggtcagggtgatc
tggcacaaccgccaagcggtgcgctcccacctggagcaccgagcggctcatgcggctacc
ttcatgggtacgcgactgcgattcctgtcgcgcatctggcacattcttggcatcggctac
ttcaccattttgctggtgctcagccagatcgacccgaccaatgcgctgcccttcatggcc
cgggccacgctgcaaacgctgttgtccatcggcgcgggcagtctcatcatcctcatgctg
aacacggtgctggcaaaacgcatccatctgcccgatgacctgcgccgtcggcttcctctg
ctcgagactcgcgtcaacgcctatgtgccggccaccctgaagttcatcggctggatcgta
cggatcgtcatcctcttgctcatactggatgcgtggcatgcgttcgatctgtcgagctgg
ttggcgtctgaccgcggggcagcggccatccgcatggtgatcaacatcgccattgtgctg
ctcatcgccaccctggcctggaccgtgatcgccagcgtcatcgaacaccgcctcagccaa
agcgaaggctgcggcatgcccagcgcgcgcgaacgcacgctgctggcgctgtttcgcaat
gctgctctgatcgtcatcgtcaccatgacgctgatggtgctcttgtcgcaaatcggcatc
gacgtgggcccgcttatcgccggcgctggcgtggtgggcctggccattggctttggcgcc
cagaagctggtgcaggacatcatcaccggggttttcattcagctggagaacggcatgaat
gaaaacgacgtcgtggaggtcgccggcgtcttcggcaccgtagaaaaaatgacgatccgc
tcggtcggcatacggacgctggacgggggctaccatctggttcccttctcatcggtggat
gttgtggccaatcacatgcgtgatttctcctatcacctgggcgaatacacgatcgcgcat
cgcgaaagcgttgacgacgccatcgaacatatgcgcgcggcgtttgccgaattgttgacc
gactcggtcctgggtcctgagatcatcgaggacatgacggttgccggtgtcaccgccgtc
aacgacaagggcgtcaccatccgcattctcatcaagaccacgcccgggatgcagtgggcc
gtgcaacgcggctacaaccgcctgctgaagaaacacttcgacgcggccaacatcgagctg
ccctatcctcatacggtggtgtacttcggccaggacaagcgcgggtatgcgcctgcgacc
aacgtcgtcatgcaacccgaacgcctcgatcaaggagagaacgccgccgcgcccggacaa
acccgccgggcgctggagccgacggatcgcgccgacgatacctccgaggtgcttggcaat
gagctcgagcttcgtgacgagccgcctcgccagggctag
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