Bordetella holmesii ATCC 51541: D560_0374
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Entry
D560_0374 CDS
T03052
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D560_0374 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bho03019
]
D560_0374 (groL)
03110 Chaperones and folding catalysts [BR:
bho03110
]
D560_0374 (groL)
03029 Mitochondrial biogenesis [BR:
bho03029
]
D560_0374 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bho04147
]
D560_0374 (groL)
Enzymes [BR:
bho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
D560_0374 (groL)
Messenger RNA biogenesis [BR:
bho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D560_0374 (groL)
Chaperones and folding catalysts [BR:
bho03110
]
Heat shock proteins
HSP60 / Chaperonin
D560_0374 (groL)
Mitochondrial biogenesis [BR:
bho03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
D560_0374 (groL)
Exosome [BR:
bho04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D560_0374 (groL)
Exosomal proteins of other body fluids (saliva and urine)
D560_0374 (groL)
Exosomal proteins of breast cancer cells
D560_0374 (groL)
Exosomal proteins of colorectal cancer cells
D560_0374 (groL)
Exosomal proteins of bladder cancer cells
D560_0374 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHV93748
LinkDB
All DBs
Position
349931..351562
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKQVLFADDARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAIVQEGLKYVAAGFNPIDLKRGI
DKAVAAAVAELKKASKPVTTSKEIAQVGSISANSDSSIGQIIADAMDKVGKEGVITVEDG
KSLENELDVVEGMQFDRGYLSPYFINNPDKQVAALDDPFVLIYDKKISNIRDLLPVLEQV
AKSSRPLLIIAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTV
ISEETGMSLEKASLQELGQAKRIEVAKENTTIIDGAGDGKSIEARVKQIRTLIEEATSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALL
RAKQAITGLQGDTPDQNAGIKLILRAVEEPLRTIVANAGEEASVVVNTVLAGKGNYGYNA
ATGEYTDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELAEDKPAAPAMPGGMGG
MDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaagcaagttctgtttgccgatgatgcccgcgtgcgcatcgttcgcggcgtg
aatgttctcgccaacgctgtgaagaccaccctgggcccgaagggtcgcaacgtcgtgctg
gagcgctcgttcggcgccccgaccgtgaccaaggacggtgtgtctgtcgccaaggaaatc
gaactgaaggacaagttcgagaacatcggcgcccagctggtcaaggacgttgcgtccaag
acctccgacaacgccggtgacggcaccacgaccgccaccgtgctggcccaggccatcgtt
caggaaggcctgaagtacgttgccgccggtttcaacccgatcgacctcaagcgcggtatc
gacaaggctgtggccgctgccgtcgccgagctgaagaaggcttccaagccggttaccacc
agcaaggaaatcgcccaggttggctcgatttcggccaacagcgacagctccatcggccag
atcatcgctgacgcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaagacggc
aagtcgctggaaaacgaactggatgtcgtcgaaggcatgcagtttgaccgtggctacctg
tcgccctacttcatcaacaaccccgacaagcaagtcgccgctctggacgatcctttcgtc
ctgatctacgacaagaagatcagcaacatccgtgatctgctgccggtgctggaacaagtc
gccaagtcgagccgtccgctgctgatcatcgccgaggacgtcgagggcgaagccctggcc
accctggttgtgaacaacatccgtggcattctgaagaccaccgccgtcaaggctccgggc
ttcggcgatcgccgcaaggccatgctggaagacatcgccatcctgaccggcggcaccgtg
atctcggaagagaccggcatgtccctggaaaaggcctcgctgcaagaactgggccaagcc
aagcgcatcgaagtcgccaaggaaaacaccaccatcatcgacggcgccggcgacggcaag
tcgatcgaggcgcgcgtcaagcagatccgcaccctgatcgaagaagccacttcggactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatccgc
gtcggtgctgccaccgaagtcgaaatgaaagaaaagaaggcccgcgttgaagacgccctg
cacgctacccgcgctgctgtggaagaaggcgtggttgctggcggcggcgttgcgctgctg
cgtgccaagcaagccatcaccggcctgcaaggcgacactcccgaccagaacgccggtatc
aagctgatcctgcgtgctgtcgaagagccgctgcgcaccatcgtggccaatgccggcgaa
gaagccagcgtcgtggtcaacaccgttctggctggcaagggtaactacggttacaacgcc
gccaccggcgagtacaccgacctggtcgagcaaggcgttctggatcccaccaaggtgacc
cgcactgccctgcaaaacgccgcttcggtggccagcctgctgctgacggctgaagccgcc
gtggtcgagctggcagaagacaagcccgctgccccggccatgccgggtggcatgggcggc
atggacttctaa
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