Bordetella holmesii ATCC 51541: D560_0387
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Entry
D560_0387 CDS
T03052
Name
(GenBank) tonB-dependent siderophore receptor family protein
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
bho
Bordetella holmesii ATCC 51541
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bho02000
]
D560_0387
Transporters [BR:
bho02000
]
Other transporters
Pores ion channels [TC:
1
]
D560_0387
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
AHV91327
LinkDB
All DBs
Position
complement(361454..363913)
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AA seq
819 aa
AA seq
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MASRQSSTFLVTLLRARPARLCLAVQLALAAPAAVWAQAASATDIVFAIAPTTLDQALGQ
FGSAAKLTVAASPTLTRGVMTQGLSGRYTPEQGLAQLLAGTGLQAVANPNGEGYQLRRAP
QDGAGVSTLAPVAVTGAYDMAATEGSGSYTSGVVTIGKGKQSVKDIPQSVTVVTRQRMDD
QNATSLDDVLANSTGMTLYKSPMGGNYVFSRGFRVDTYQFDGVNREFYYPQANSFTSSTV
ILDRVEIVRGANGLLQGAGSPSASVNLVRKRPLAENQLQLTTSAGSWDNYRADIDATGPL
NESGTLRGRAVASYNDRDYFYDVAKSRNTVLYGVLSYDIAPSTTITGGVSHEDLRSTPFF
HGLPHYTNGDDIGLKRSTSFAQHWNRWNGKQTSAFVELAHRFNQDWSVKLTGNSTQESND
SKYAFTEGAVNPLTGSGPTMYAGIFDFSTHNKALNLDIDGVFDALGRKHSVSFGASVNHL
TSKNDFATARLGRGLDIWNPDHDVPEPTDAWLRENAYRGDATIIKMKQTGVYGVGRFSLA
DPLTLVAGARVSWYENTARYRDSGDRYTDPYKENGVVTPYGGLIYAFNPQWSGYVSYAEI
FEPQNALDATGKLLDPMVGKNYELGVKGELMGGRVNTSIAVFRIDQKNRAQQDLAGICSV
GDVCYISSGKVRSQGVEAEISGEVLPGWQVFAGYTFNSLKFLDDTSVSNTNFGRTFTPKH
MLRLWSDYRLPGELSAWTLGAGVNYQSGSYTETRGVRVSQSPYAVWNARVSYKINKNWTA
ALNVNNVFDKTYYQTIGAPGWGSFYGDPRNATLTLRGTF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacgccagtcttcaacctttttagtcaccctgctgcgtgcgcgccccgcgcgt
ttgtgtcttgccgttcaacttgcgctggccgccccggccgcagtctgggcccaggctgcg
tcggccacggatatcgttttcgccattgcgcccactacgctggaccaggccctgggccag
tttggcagcgctgccaaactcaccgtggctgcatcgccgactctgacgcgtggtgtcatg
acccaggggctgtcgggccgttacacgcctgaacagggcttggcccagttgctggctggc
accggcttgcaggccgtggccaatcccaacggcgaaggctaccagttgcgccgtgcgccg
caggatggcgccggtgtatcgacgttggcgccggtggccgtgaccggagcctacgatatg
gcggccaccgaaggcagcggcagctacaccagtggcgttgtcaccatcggcaaagggaaa
cagtcggtcaaggatatcccgcagtcggtcactgtcgtgacccgtcagcgcatggatgat
cagaacgccaccagtctcgatgacgtgctggccaacagcacgggcatgacgctttacaaa
agcccgatgggcggcaattacgtgttctctcgtggtttccgcgtcgacacctatcagttc
gatggcgtcaatcgcgagttttactatccgcaagccaacagcttcaccagcagcacggtc
atcctcgaccgcgtcgagatcgtgcgcggcgccaacggcctgctgcaaggcgccggctcg
cccagtgcgtccgtgaacctcgtgcgcaagcgtccgctggcagaaaaccaactgcagttg
accaccagcgccggatcctgggacaactaccgcgccgacatcgatgccaccgggccgctg
aatgagtcgggcacgttgcgcggccgcgccgtggccagctataacgaccgtgactatttc
tacgacgtggccaagagccgcaacacggtgctgtatggcgtactgagctatgacatcgcc
ccgtcaaccacgatcacgggtggggtaagccacgaagacctgcggtcgacgccgtttttc
cacggtctgccccattacaccaatggcgatgacatcgggctcaagcgctctacgtcgttc
gcgcagcactggaaccgctggaacggcaagcagacctcggcctttgtcgagttggcgcac
cgcttcaatcaggactggtcggtcaagctcacgggtaacagcacgcaagagtccaacgac
agcaaatacgccttcaccgaaggggcggtcaatccgctgaccgggtcgggcccgacaatg
tatgcggggatttttgatttttccacgcacaacaaagcacttaatctggacatcgatggt
gttttcgacgccctcgggcgcaagcactcggtaagtttcggtgccagcgtcaatcatctg
accagcaagaacgacttcgcgacggcgcgtcttgggcgcggcttggacatctggaatcct
gaccatgatgtgcccgaacccaccgatgcctggctgcgcgaaaatgcctaccgaggtgat
gcgaccatcatcaagatgaagcagaccggcgtttacggtgtgggccgattcagcctggcc
gatccgctgaccctggtggccggggcccgcgtgagctggtacgagaacactgcgcgctat
cgtgacagcggcgatcgctacaccgatccgtacaaggaaaacggtgtggtcacgccttat
ggcggcctgatctacgccttcaatccgcaatggtccgggtatgtcagctatgcggagatc
ttcgagccgcagaatgcgctcgatgccaccggcaagttgctcgatcccatggtgggcaag
aactatgagctcggcgtcaagggcgagttgatgggcggcagggtgaacacctcgatcgca
gtcttccgtatcgatcagaaaaaccgtgcgcagcaagatctggcaggtatctgctctgtg
ggcgatgtgtgctacatctccagcggcaaggtccgcagccagggcgtcgaggccgaaatc
agtggcgaggtgctgccaggctggcaggtgttcgcgggctacaccttcaacagcctgaag
ttcctcgacgacacctcggtgtccaacaccaacttcggccgcacgttcacgcccaaacac
atgttgcgtctgtggtcggactatcgtttgcccggcgaattgtcggcgtggaccctgggc
gcgggcgtgaactaccagtcaggcagttatacggaaacgcgtggggtgcgtgtgtcgcag
tcgccgtatgccgtctggaacgcgcgtgtgagctacaagatcaacaagaactggacggcg
gcgttgaacgtcaacaacgtgttcgacaaaacctactaccagaccattggtgcgccgggt
tggggaagcttctacggcgatccgcgtaacgcgacgctgaccttgcgcggcacgttctaa
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