Bordetella holmesii ATCC 51541: D560_0636
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Entry
D560_0636 CDS
T03052
Name
(GenBank) methyladenine glycosylase family protein
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D560_0636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bho03400
]
D560_0636
Enzymes [BR:
bho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
D560_0636
DNA repair and recombination proteins [BR:
bho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D560_0636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
AHV93135
LinkDB
All DBs
Position
complement(589276..589878)
Genome browser
AA seq
200 aa
AA seq
DB search
MDARKDFPDGHPRCGWVDQSVIYCDYHDQEWGRPSADDRHLFEQICLEGMQSGLSWRTIL
NKRDGYRQAFAGFDIDAIARFGREDVERLVQDAGIVRHRGKIEAIINNARRAREMREREG
SLAAFFWRFEGPDRPLTDGAPTAEAIALSKALKNLGWSFVGPTTVYAFMQSIGMVNDHHA
ECFAQQACAHARSHFKRPSA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcgcaaggactttcccgatggccatccgcgctgcggttgggtcgatcaatcc
gtcatctactgcgactatcacgatcaggagtgggggcgccccagtgccgatgaccggcac
ctgttcgagcagatctgccttgaaggcatgcaatcgggtttgagctggcgcaccatcctg
aacaagcgcgacggctaccggcaggcctttgctggctttgacatcgacgcaatcgcccgg
tttggccgggaggacgtcgagcggctggtgcaagacgccggcatcgtcaggcaccgaggc
aagatagaagccatcatcaacaatgcgcggcgtgcacgcgagatgcgcgagcgtgaaggt
tcgctggcggcttttttctggcgcttcgaagggccggaccggccgttgaccgacggcgcg
ccgacggccgaagccatcgcgttgtccaaagccctgaagaacctgggctggtctttcgtc
gggccgaccacggtctatgccttcatgcaatcgatcggcatggtcaacgaccatcatgcc
gaatgctttgcgcaacaagcgtgcgcgcatgcgcgcagccacttcaagcgcccgagtgcg
tga
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