KEGG   Bordetella holmesii ATCC 51541: D560_0828
Entry
D560_0828         CDS       T03052                                 
Name
(GenBank) type II/IV secretion system family protein
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
bho  Bordetella holmesii ATCC 51541
Pathway
bho02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bho00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    D560_0828
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bho02044]
    D560_0828
   02035 Bacterial motility proteins [BR:bho02035]
    D560_0828
Enzymes [BR:bho01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     D560_0828
Secretion system [BR:bho02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   D560_0828
Bacterial motility proteins [BR:bho02035]
 Pilus system
  Pilus assembly proteins
   D560_0828
SSDB
Motif
Pfam: T2SSE AAA_16 AAA_28 Dynamin_N AAA_29 AAA_7 FtsK_SpoIIIE AAA_21 Mg_chelatase Zeta_toxin nSTAND3
Other DBs
NCBI-ProteinID: AHV93280
LinkDB
Position
complement(777684..779045)
AA seq 453 aa
MSASMVFGNGEAADEFAGSQRYQDVKSQAYEHLLSRIEELGAEFGRWTRAAIQEFVEIEV
AGFARMRRLALNEAELSHISSALTKELAGLGPLEDLLADPAVEDVLINGYNNVFVSRRGV
LARESLRFTDNQHVLRIVRRILAPIGRRLDESSPMVDARLPDGGRLNVVIEPLAVDGPMV
SIRKFRQDPLKPADLLVLGTFNEEIHRLLSLAVKHRCNVLVSGGTSSGKTSLLNALAFFI
PEGERVVTVEDTAELSLNHPHVVRLESRQGGFDGAGAISIRDLIRNSLRMRPDRVVVGEV
RGAEVMDMLQAMNTGHEGSMATIHANSPRECLYRIEMLAGFAGFQGSEDSLRRQIASALD
FIIQIGRLPNGKRRVISVTEVTGMGDNVIATQELYRYESVLAPDGEDRDNWVGLGINPHT
PKLARAWADMRASLAPEDPEPSSGGAGFWGRRR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtcggcatcgatggtgtttggtaacggcgaggcggcggacgaattcgccggttcgcaa
cgctaccaggatgtcaaaagccaggcgtatgaacacctgctctcgcgcatcgaagagttg
ggagcggaatttggtcgttggacacgcgcggccattcaggagttcgttgaaatcgaggtg
gccggctttgcccgcatgcggcggttggcgctcaacgaagccgagctgtcccacatcagc
agcgcattgaccaaggagctggcggggctgggcccgctggaggatctgctggccgatccg
gctgtcgaagatgtgctgatcaacggctacaacaatgtctttgtctcgcgccgcggcgtg
ctggcgcgcgagagcttgcgattcaccgacaaccagcatgtgctgcgtatcgtgcgccgc
attctggcgccgataggccggcggctggatgagtccagtcccatggtggacgcgcggctg
cccgatggcggccggcttaatgtggtcatcgaacccctggccgtcgacgggcccatggtg
tccattcgaaaattccgccaggatccgctcaaacctgccgacctgctcgtgctggggacg
ttcaacgaagagattcaccgcttgctcagcttggctgtcaaacaccgctgcaatgtgctg
gtctccggtggaacgagttccggcaagacatcgttgctcaatgccttggcgtttttcatc
ccggaaggcgagcgggtcgtcacggtggaggacacggccgaactgtcgctcaaccacccg
cacgtggtgcggctggagtcgcgtcaggggggatttgacggcgcgggcgccatcagcatt
cgcgatctcatacgcaacagcctgcgcatgcggcccgaccgcgtggtggtgggcgaagtg
cgcggcgccgaggtcatggatatgttgcaggccatgaataccggtcacgaaggttcgatg
gccaccattcacgccaattcgccgcgcgaatgcctctatcgcatcgagatgctggccggt
ttcgcaggttttcagggcagtgaggacagcctgcggcggcagatcgccagcgcgctggat
ttcatcatccagatcggccgcctgcccaatggcaaacgtcgcgtcatttccgtgaccgag
gtcaccggcatgggcgataacgtgatcgccacgcaggagctctatcggtatgagtctgtc
ctcgcgccagatggcgaagacagggacaactgggtcggcctgggcatcaatccgcatacg
cccaagttggcgcgtgcatgggccgatatgcgtgcgtcgctcgcgcccgaagaccccgaa
cccagttcgggtggcgcgggcttctggggacggcgtcgatga

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