Bordetella holmesii ATCC 51541: D560_0900
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Entry
D560_0900 CDS
T03052
Name
(GenBank) periplasmic binding domain protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho02010
ABC transporters
bho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D560_0900
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D560_0900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bho02000
]
D560_0900
Transporters [BR:
bho02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
D560_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AHV91079
LinkDB
All DBs
Position
complement(846549..847754)
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AA seq
401 aa
AA seq
DB search
MMHYRSIAALALGLAFSSAQANDANGVKIGVLTDMAGVTADATGKGSVEAARMAIEEVGG
RVLDKPVSLVVGDHQHKPDIGSSLVRKWYDADGVDVVVDVPNSSVALAVQGIAREKKKLV
LVSSAGTTALSQAQCSPYGVQWTYTTYALSRGTANAVVKEGNKRWFILASDYAFGKQLAA
DTEAVVKADGGQVLGTVYHPLNASDFASFLLQAQASKAQIIGIANAGGDTISTIKQAAEF
GVSGGGQQLAAMLLLLTDVHSLGLQAAQKTYLTVPSYWDMNEGTRKFSKDFQARVGHPPT
FLQAGVYGSVRHYLRAVQAAGTTDSDAVMAKMKALPIDDAFSQNARIREDGLVVRDMMLA
QVKTPEQSKGAWDYYNIVRTIPGDTLVWPLSESQCPLVKKP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgatgcactatcgcagtattgctgcactggcgttgggcctggcgttcagtagcgcgcag
gccaatgatgccaacggggtcaagattggggtactgaccgacatggctggcgtcacggcc
gatgccaccggcaaggggtcggtcgaggccgcgcgcatggcgatcgaggaagtgggcggc
cgggtgctggacaagcctgtgagcctggtggtgggcgatcatcagcataagccggacatc
ggcagcagcctggtgcgcaagtggtacgacgccgacggcgtggatgtggtggtcgacgtc
ccgaattcgtcggtggcgttggcggtgcaaggcatcgcccgcgaaaagaaaaaactcgtt
ctggtctccagcgccggcacgacggcgttgagccaggcgcaatgctcgccatatggcgtg
cagtggacctacaccacctacgcgctgtcgcgcggtacggccaacgccgtggtcaaggaa
ggcaataagcgctggttcatcctggcctccgattatgcgttcggcaaacagcttgccgcc
gataccgaagccgtggtcaaggccgatggaggccaggtgctgggcacggtctaccatccg
cttaacgcgtccgatttcgcgtccttcctgctgcaggcgcaagcgtccaaggcgcagatc
atcggtatcgcgaacgcgggcggagacaccatctcgacgatcaagcaggccgccgagttc
ggcgtctccggtggcgggcagcaattggcagccatgctgctgctgctcaccgacgtgcac
agcctgggcctgcaggccgcgcagaaaacctatctgaccgtgccgtcgtattgggacatg
aatgagggcacccgcaagttttccaaggacttccaggcccgcgtgggccatccgccaacc
ttcctgcaggccggtgtctatggttcggtgcgccattatctgcgcgcagtgcaggcggcc
ggcaccacggacagcgatgccgtaatggccaagatgaaggcgctgcccatcgacgacgcg
ttcagccagaacgcccgcatccgcgaggatggcctggtggtgcgcgacatgatgctggcg
caggtcaaaacccccgagcagtccaagggcgcctgggactattacaacatcgtgcgcacc
atccccggcgacaccctggtttggccgctgtccgaaagccaatgcccgctggtgaaaaaa
ccgtga
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