Bordetella holmesii ATCC 51541: D560_0923
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Entry
D560_0923 CDS
T03052
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D560_0923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bho03021
]
D560_0923
Transcription machinery [BR:
bho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D560_0923
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_20
HTH_23
HTH_24
HTH_29
GerE
HTH_40
TPR_4
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AHV94938
LinkDB
All DBs
Position
866645..867148
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AA seq
167 aa
AA seq
DB search
MLPTTLETLYIDHHSWLRGWLHRRLGNREQAADLAHDTFIRLLCSERVPAVLDEPRAFLT
TVAQRLLSNHWRREKLERAYLDALALAPQPLARSPEERALLLETLFELDRQLDGLPTLVR
RAFLLSQLEGQTHAQVAQTLGLSVPTVKRHIVRALTRCCFADLGGSR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcccacgaccctagaaaccctctacatcgaccaccactcctggttgcgagggtgg
ctgcaccgccgcctgggcaaccgggaacaagccgccgatctggcgcacgacaccttcatc
cgcctgctgtgcagcgagcgtgtgccggccgtcctggacgagccccgcgcctttctgacc
acggtcgcacagcggctgctgtcgaatcattggcgccgcgagaagctcgaacgcgcctac
ctcgacgctctggcgctggcaccacagcccctggcccgctcgccggaagagcgcgcgctt
ttgctcgagacgctgttcgaactcgaccggcagctcgacgggctgccgaccctcgtgcgg
cgtgcctttctactgtcgcaactggagggccagacccatgcgcaggttgcccagaccctc
ggcctatccgtgccgacggtaaaacgccacatcgtccgcgcgctgacacgctgctgcttc
gccgatctcggcggttcgcgatga
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